MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 172525 bp
Accession: NC_014723 Location: 1..172525 Organism: Burkholderia rhizoxinica HKI 454 Replicon: plasmid pBRH02
Accession: NC_014723 Location: 1..172525 Organism: Burkholderia rhizoxinica HKI 454 Replicon: plasmid pBRH02
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RBRH_RS15280 () | 389..1147 | + | 759 | WP_013436639.1 | hypothetical protein | - |
| RBRH_RS15285 () | 1228..4764 | + | 3537 | WP_013436640.1 | hypothetical protein | - |
| RBRH_RS15290 () | 4769..8113 | + | 3345 | WP_013436641.1 | hypothetical protein | - |
| RBRH_RS15295 () | 8124..15968 | + | 7845 | WP_013436642.1 | LysM peptidoglycan-binding domain-containing protein | - |
| RBRH_RS18260 () | 16162..16904 | + | 743 | Protein_4 | IS3 family transposase | - |
| RBRH_RS15310 () | 17579..18804 | + | 1226 | Protein_5 | group II intron reverse transcriptase/maturase | - |
| RBRH_RS15315 () | 18888..19352 | + | 465 | Protein_6 | IS3 family transposase IS1416 | Transposase |
| RBRH_RS15320 () | 19427..19657 | - | 231 | Protein_7 | IS3 family transposase ISBcen15 | Transposase |
| RBRH_RS15325 () | 20227..21108 | - | 882 | WP_013436649.1 | ParB/RepB/Spo0J family partition protein | - |
| RBRH_RS15330 () | 21109..21921 | - | 813 | WP_041755093.1 | Chromosome partitioning protein ParA | VF |
| RBRH_RS16595 () | 22107..22605 | + | 499 | Protein_10 | IS91 family transposase ISShvi3 | Transposase |
| RBRH_RS15340 () | 22694..23029 | - | 336 | WP_013436652.1 | helix-turn-helix domain-containing protein | - |
| RBRH_RS15345 () | 23026..23346 | - | 321 | WP_049786587.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RBRH_RS15350 () | 23337..23636 | - | 300 | WP_041755094.1 | IS91 family transposase ISMno24 | Transposase |
| RBRH_RS19505 () | 24059..24262 | + | 204 | WP_041755095.1 | hypothetical protein | - |
| RBRH_RS15360 () | 24991..25383 | - | 393 | WP_013436657.1 | helix-turn-helix domain-containing protein | - |
| RBRH_RS15365 () | 25496..26101 | + | 606 | WP_157864635.1 | hypothetical protein | - |
| RBRH_RS15370 () | 26150..27199 | - | 1050 | WP_041755145.1 | Fic family protein | - |
| RBRH_RS15375 () | 27682..28887 | + | 1206 | WP_041755146.1 | Sporulation initiation inhibitor protein Soj | VF |
| RBRH_RS15380 () | 28884..29912 | + | 1029 | WP_041755097.1 | chromosome partitioning protein ParB | - |
| RBRH_RS18275 () | 30373..31593 | + | 1221 | WP_157864637.1 | hypothetical protein | Relaxase |
| RBRH_RS19515 () | 32371..32466 | - | 96 | Protein_21 | IS200-IS605 family transposase IS609 | Transposase |
| RBRH_RS18285 () | 32628..33038 | + | 411 | Protein_22 | transposase | - |
| RBRH_RS15410 () | 33133..33360 | + | 228 | WP_041755101.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| RBRH_RS18290 () | 33344..33610 | + | 267 | WP_013436667.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RBRH_RS15415 () | 34071..34325 | + | 255 | WP_041755148.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| RBRH_RS15420 () | 34322..34747 | + | 426 | WP_013436669.1 | type II toxin-antitoxin system VapC family toxin | - |
| RBRH_RS15425 () | 34986..35276 | + | 291 | WP_041755149.1 | nucleotidyltransferase family protein | - |
| RBRH_RS15430 () | 35273..35668 | + | 396 | WP_013436671.1 | DUF86 domain-containing protein | - |
| RBRH_RS18295 () | 35794..35907 | + | 114 | Protein_29 | transposase | - |
| RBRH_RS19520 () | 35915..36181 | - | 267 | Protein_30 | ISNCY family transposase ISBj12 | Transposase |
| RBRH_RS19525 () | 36181..36692 | - | 512 | Protein_31 | transposase | - |
| RBRH_RS19530 () | 37123..37362 | + | 240 | WP_157864638.1 | hypothetical protein | - |
| RBRH_RS15440 () | 37448..37723 | + | 276 | WP_049786588.1 | hypothetical protein | - |
| RBRH_RS15445 () | 37822..38091 | + | 270 | WP_041755103.1 | hypothetical protein | - |
| RBRH_RS15450 () | 38657..39160 | + | 504 | WP_157864639.1 | hypothetical protein | - |
| RBRH_RS15455 () | 40437..41387 | + | 951 | WP_041755151.1 | Recombination-promoting nuclease RpnA | VF |
| RBRH_RS15460 () | 41777..41920 | - | 144 | Protein_37 | IS110 family transposase | - |
| RBRH_RS15470 () | 42464..43584 | + | 1121 | WP_157864640.1 | IS3 family transposase IS407 | Transposase |
| RBRH_RS15480 () | 44424..45065 | + | 642 | WP_041755152.1 | DNA methyltransferase | - |
| RBRH_RS15485 () | 45587..45787 | + | 201 | WP_013436683.1 | hypothetical protein | - |
| RBRH_RS15490 () | 45800..46339 | + | 540 | WP_013436684.1 | hypothetical protein | - |
| RBRH_RS15495 () | 46866..47153 | + | 288 | WP_013436686.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RBRH_RS15500 () | 47155..47451 | + | 297 | WP_013436687.1 | putative addiction module antidote protein | Antitoxin Detail |
| RBRH_RS15505 () | 47734..48003 | - | 270 | WP_013436688.1 | hypothetical protein | - |
| RBRH_RS15510 () | 48316..48708 | + | 393 | WP_013436689.1 | hypothetical protein | - |
| RBRH_RS15515 () | 48695..50719 | + | 2025 | WP_013436690.1 | type IV secretion system DNA-binding domain-containing protein | - |
| RBRH_RS15520 () | 50947..53813 | + | 2867 | Protein_47 | Multifunctional conjugation protein TraI | Relaxase |
| RBRH_RS15525 () | 54473..55253 | + | 781 | Protein_48 | histidine kinase | - |
| RBRH_RS15530 () | 55222..55881 | - | 660 | WP_041755153.1 | response regulator transcription factor | - |
| RBRH_RS15535 () | 56347..56844 | + | 498 | WP_013436695.1 | hypothetical protein | VF |
| RBRH_RS15540 () | 56848..57217 | + | 370 | Protein_51 | hypothetical protein | - |
| RBRH_RS15545 () | 57303..57635 | + | 333 | WP_013436697.1 | TrbC/VirB2 family protein | - |
| RBRH_RS15550 () | 57651..57944 | + | 294 | WP_041755108.1 | type IV conjugative transfer system protein TraL | - |
| RBRH_RS15555 () | 57958..58545 | + | 588 | WP_013436699.1 | type IV conjugative transfer system protein TraE | - |
| RBRH_RS15560 () | 58487..59218 | + | 732 | WP_013436700.1 | type-F conjugative transfer system secretin TraK | - |
| RBRH_RS15565 () | 59211..60551 | + | 1341 | WP_041755109.1 | TraB/VirB10 family protein | - |
| RBRH_RS15570 () | 60544..61284 | + | 741 | WP_041755110.1 | DsbC family protein | - |
| RBRH_RS15575 () | 61308..61934 | + | 627 | WP_157864652.1 | TraV family lipoprotein | - |
| RBRH_RS15580 () | 61984..64593 | + | 2610 | WP_013436704.1 | type IV secretion system protein TraC | - |
| RBRH_RS15585 () | 64597..65025 | + | 429 | WP_013436706.1 | hypothetical protein | - |
| RBRH_RS15590 () | 65022..65498 | + | 477 | WP_041755111.1 | S26 family signal peptidase | - |
| RBRH_RS15595 () | 65485..66120 | + | 636 | WP_041755112.1 | type-F conjugative transfer system protein TraW | - |
| RBRH_RS15600 () | 66117..67118 | + | 1002 | WP_013436709.1 | TraU family protein | - |
| RBRH_RS15605 () | 67115..67891 | + | 777 | WP_041755155.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| RBRH_RS16615 () | 67891..68967 | + | 1077 | WP_013436711.1 | hypothetical protein | - |
| RBRH_RS15615 () | 68964..70220 | + | 1257 | WP_041755113.1 | conjugal transfer protein TraN | - |
| RBRH_RS15620 () | 70217..70576 | + | 360 | WP_013436713.1 | hypothetical protein | - |
| RBRH_RS15625 () | 70584..71372 | + | 789 | WP_013436714.1 | conjugal transfer protein TraF | - |
| RBRH_RS15630 () | 71383..72786 | + | 1404 | WP_013436715.1 | conjugal transfer protein TraH | - |
| RBRH_RS15635 () | 72802..75849 | + | 3048 | WP_041755157.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| RBRH_RS15640 () | 75881..76165 | - | 285 | WP_013436717.1 | hypothetical protein | - |
| RBRH_RS15645 () | 76237..76434 | - | 198 | Protein_72 | hypothetical protein | - |
| RBRH_RS15650 () | 76925..77650 | + | 726 | WP_041755114.1 | M48 family metalloprotease | - |
| RBRH_RS15655 () | 78339..78602 | + | 264 | WP_013436721.1 | hypothetical protein | - |
| RBRH_RS16620 () | 78757..79899 | + | 1143 | Protein_75 | zeta toxin family protein | - |
| RBRH_RS19535 () | 81560..81751 | + | 192 | Protein_76 | IS3 family transposase | - |
| RBRH_RS15680 () | 82428..82841 | - | 414 | WP_041755116.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| RBRH_RS15685 () | 82841..83114 | - | 274 | Protein_78 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| RBRH_RS15690 () | 84034..85583 | + | 1550 | Protein_79 | IS21 family transposase ISBmu3 | Transposase |
| RBRH_RS15695 () | 85599..86348 | + | 750 | WP_013436734.1 | IS21 family transposase ISBmu3 | Transposase |
| RBRH_RS18340 () | 86457..87407 | - | 951 | WP_013436735.1 | hypothetical protein | - |
| RBRH_RS16625 () | 87589..88116 | - | 528 | Protein_82 | transposase | - |
| RBRH_RS19805 () | 88325..89680 | - | 1356 | WP_041755119.1 | hypothetical protein | - |
| RBRH_RS19540 () | 90872..91069 | - | 198 | WP_157864642.1 | hypothetical protein | - |
| RBRH_RS15720 () | 91347..92060 | + | 714 | WP_041755120.1 | translesion DNA synthesis-associated protein ImuA | - |
| RBRH_RS19545 () | 91987..93453 | + | 1467 | WP_013436740.1 | DNA polymerase Y family protein | - |
| RBRH_RS15730 () | 93458..96592 | + | 3135 | WP_041755121.1 | error-prone DNA polymerase | - |
| RBRH_RS15735 () | 96986..97383 | + | 398 | Protein_88 | TAL effector repeat-containing protein | - |
| RBRH_RS18365 () | 97681..98331 | + | 651 | WP_157864643.1 | hypothetical protein | - |
| RBRH_RS15745 () | 98425..100026 | - | 1602 | WP_083813569.1 | hypothetical protein | - |
| RBRH_RS15750 () | 100384..101985 | - | 1602 | WP_041755125.1 | hypothetical protein | - |
| RBRH_RS15755 () | 102444..104045 | - | 1602 | WP_013436746.1 | hypothetical protein | - |
| RBRH_RS15760 () | 104797..105732 | + | 936 | WP_013436750.1 | TALE-like protein | - |
| RBRH_RS15765 () | 106351..109344 | + | 2994 | WP_013436752.1 | TAL effector repeat-containing protein | - |
| RBRH_RS19550 () | 110386..110472 | + | 87 | WP_157864653.1 | TAL effector repeat-containing protein | - |
| RBRH_RS18395 () | 110485..110712 | + | 228 | WP_013436754.1 | TAL effector repeat-containing protein | - |
| RBRH_RS15770 () | 111040..111384 | - | 345 | WP_157864654.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RBRH_RS15775 () | 111399..111701 | - | 303 | WP_041755161.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| RBRH_RS15780 () | 112411..113235 | + | 825 | WP_013436758.1 | DUF945 domain-containing protein | - |
| RBRH_RS18405 () | 113445..113858 | + | 414 | Protein_100 | chromosome partitioning protein ParB | - |
| RBRH_RS15790 () | 114215..114921 | - | 707 | Protein_101 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| RBRH_RS15795 () | 114918..115397 | - | 480 | WP_013436764.1 | helix-turn-helix transcriptional regulator | - |
| RBRH_RS15800 () | 115833..116066 | + | 234 | WP_157864644.1 | hypothetical protein | - |
| RBRH_RS15805 () | 116066..116287 | + | 222 | WP_041755130.1 | helix-turn-helix domain-containing protein | - |
| RBRH_RS19555 () | 116511..116738 | + | 228 | WP_157864645.1 | hypothetical protein | - |
| RBRH_RS15815 () | 116830..117119 | + | 290 | Protein_106 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RBRH_RS15820 () | 117130..117441 | + | 312 | WP_041755132.1 | HigA family addiction module antidote protein | - |
| RBRH_RS15825 () | 117627..118607 | - | 981 | WP_013436771.1 | tyrosine-type recombinase/integrase | - |
| RBRH_RS15830 () | 118742..118942 | - | 201 | WP_157864646.1 | hypothetical protein | - |
| RBRH_RS15840 () | 119226..119528 | - | 303 | WP_013436773.1 | putative addiction module antidote protein | - |
| RBRH_RS19715 () | 119525..119698 | - | 174 | Protein_111 | addiction module toxin RelE | - |
| RBRH_RS19560 () | 119704..120051 | + | 348 | Protein_112 | IS5/IS1182 family transposase | - |
| RBRH_RS15855 () | 120526..121773 | + | 1248 | WP_041755135.1 | 2-hydroxycarboxylate transporter family protein | - |
| RBRH_RS15860 () | 121965..122615 | - | 651 | WP_041755136.1 | DUF3800 domain-containing protein | - |
| RBRH_RS15865 () | 122906..123853 | - | 948 | Protein_115 | IS481 family transposase | - |
| RBRH_RS15870 () | 124203..125525 | + | 1323 | WP_013436784.1 | IS5 family transposase ISButh4 | Transposase |
| RBRH_RS18415 () | 125941..126234 | + | 294 | WP_013436785.1 | H-NS histone family protein | - |
| RBRH_RS18420 () | 126581..126970 | - | 390 | WP_157864657.1 | hypothetical protein | - |
| RBRH_RS15880 () | 127188..127571 | - | 384 | WP_173362442.1 | HEPN domain-containing protein | - |
| RBRH_RS15885 () | 127601..127945 | - | 345 | WP_041755163.1 | nucleotidyltransferase domain-containing protein | - |
| RBRH_RS15890 () | 128448..129437 | - | 990 | WP_013436789.1 | DNA-binding protein | - |
| RBRH_RS15895 () | 129530..130819 | + | 1290 | WP_157864647.1 | tyrosine-type recombinase/integrase | - |
| RBRH_RS16630 () | 131310..138323 | - | 7014 | WP_013436792.1 | hypothetical protein | - |
| RBRH_RS15910 () | 138338..139867 | - | 1530 | WP_013436793.1 | hypothetical protein | - |
| RBRH_RS15915 () | 139886..143854 | - | 3969 | WP_157864648.1 | hypothetical protein | - |
| RBRH_RS19565 () | 144226..144468 | + | 243 | Protein_126 | IS5 family transposase ISButh4 | Transposase |
| RBRH_RS19570 () | 145299..145628 | + | 330 | WP_157864649.1 | hypothetical protein | - |
| RBRH_RS15935 () | 145514..145981 | - | 468 | WP_157864659.1 | hypothetical protein | - |
| RBRH_RS15940 () | 146182..146532 | - | 351 | WP_013436802.1 | type II toxin-antitoxin system ChpB family toxin | Toxin Detail |
| RBRH_RS15945 () | 146526..146777 | - | 252 | WP_013436803.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RBRH_RS15950 () | 147101..147445 | + | 345 | WP_041755140.1 | hypothetical protein | - |
| RBRH_RS19575 () | 147591..148228 | - | 638 | Protein_132 | ATPase | - |
| RBRH_RS15960 () | 148459..148865 | - | 407 | Protein_133 | type II toxin-antitoxin system VapC family toxin | - |
| RBRH_RS15965 () | 148856..149110 | - | 255 | WP_013436809.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| RBRH_RS15970 () | 149716..149994 | + | 279 | WP_041755167.1 | hypothetical protein | - |
| RBRH_RS15975 () | 149991..150290 | + | 300 | WP_013436813.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| RBRH_RS18440 () | 150811..150984 | - | 174 | Protein_137 | IS110 family transposase ISAfe1 | Transposase |
| RBRH_RS15985 () | 151141..151971 | + | 831 | Protein_138 | IS5 family transposase ISButh4 | Transposase |
| RBRH_RS15990 () | 152582..153004 | + | 423 | Protein_139 | reverse transcriptase N-terminal domain-containing protein | - |
| RBRH_RS18445 () | 153064..153838 | - | 775 | Protein_140 | IS21 family transposase ISBcen13 | Transposase |
| RBRH_RS16005 () | 153835..154863 | - | 1029 | WP_041755141.1 | IS21 family transposase ISOcsp1 | Transposase |
| RBRH_RS16010 () | 154949..156016 | + | 1068 | Protein_142 | group II intron reverse transcriptase/maturase | - |
| RBRH_RS16015 () | 156140..156631 | + | 492 | Protein_143 | IS5 family transposase ISButh4 | Transposase |
| RBRH_RS19720 () | 156810..156977 | - | 168 | WP_162145576.1 | hypothetical protein | - |
| RBRH_RS16020 () | 156928..158281 | + | 1354 | Protein_145 | 2-hydroxycarboxylate transporter family protein | - |
| RBRH_RS16025 () | 158386..159159 | - | 774 | WP_013436822.1 | IS21 family transposase ISGur8 | Transposase |
| RBRH_RS16030 () | 159152..160636 | - | 1485 | WP_013436823.1 | IS21 family transposase ISGur8 | Transposase |
| RBRH_RS16035 () | 160955..161962 | - | 1008 | WP_013436824.1 | IS110 family transposase ISAfe1 | Transposase |
| RBRH_RS16040 () | 162336..163840 | + | 1505 | Protein_149 | IS66 family transposase | - |
| RBRH_RS18455 () | 163897..164037 | + | 141 | WP_157864650.1 | hypothetical protein | - |
| RBRH_RS16050 () | 164489..165210 | - | 722 | Protein_151 | IS5 family transposase | - |
| RBRH_RS16055 () | 165878..166359 | + | 482 | Protein_152 | hypothetical protein | - |
| RBRH_RS16060 () | 166362..167012 | + | 651 | WP_013436832.1 | hypothetical protein | - |
| RBRH_RS16065 () | 167352..168488 | + | 1137 | WP_013436833.1 | S53 family peptidase | - |
| RBRH_RS18465 () | 168767..169126 | + | 360 | Protein_155 | transposase | - |
| RBRH_RS18470 () | 169535..170667 | + | 1133 | Protein_156 | IS110 family transposase | - |
| RBRH_RS16080 () | 170674..172131 | - | 1458 | WP_157864651.1 | ISL3 family transposase ISAzba9 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|