MGE detailed information
MGE type: IScluster/Tn MGE length: 7279 bp
Accession: NC_014007 Location: 12628..19906 Organism: Sphingobium japonicum UT26S Replicon: plasmid pCHQ1
Accession: NC_014007 Location: 12628..19906 Organism: Sphingobium japonicum UT26S Replicon: plasmid pCHQ1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SJA_RS19580 () | 9819..10370 | + | 552 | WP_041386225.1 | recombinase family protein | - |
| SJA_RS19585 () | 10367..11155 | + | 789 | WP_013039098.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| SJA_RS22720 () | 11279..11371 | + | 93 | Protein_11 | IS5/IS1182 family transposase | - |
| SJA_RS19590 () | 11833..12165 | - | 333 | WP_007682049.1 | BrnA antitoxin family protein | Antitoxin Detail |
| SJA_RS19595 () | 12146..12454 | - | 309 | WP_007682056.1 | BrnT family toxin | Toxin Detail |
| SJA_RS19600 () | 12628..13392 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| SJA_RS19605 () | 13589..14860 | + | 1272 | Protein_15 | Tn3 family transposase TnpA_ISMpo10 | Transposase |
| SJA_RS21575 () | 14891..15133 | - | 243 | Protein_16 | hypothetical protein | - |
| SJA_RS19610 () | 15555..15929 | + | 375 | WP_013041565.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SJA_RS19615 () | 15926..16252 | + | 327 | WP_006964370.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SJA_RS19620 () | 16252..16494 | + | 243 | WP_013041566.1 | hypothetical protein | - |
| SJA_RS19625 () | 16487..16786 | + | 300 | WP_013041567.1 | hypothetical protein | - |
| SJA_RS19630 () | 16807..17919 | - | 1113 | WP_013041568.1 | hypothetical protein | VF |
| SJA_RS19635 () | 17922..18917 | - | 996 | Protein_22 | P-type conjugative transfer protein TrbL | - |
| SJA_RS22270 () | 18981..19088 | + | 108 | Protein_23 | IS6 family transposase | - |
| SJA_RS19640 () | 19142..19906 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| SJA_RS19645 () | 19935..20990 | + | 1056 | WP_013041570.1 | efflux transporter outer membrane subunit | - |
| SJA_RS19650 () | 21122..21508 | + | 387 | WP_148225626.1 | hypothetical protein | - |
| SJA_RS19655 () | 21523..21918 | + | 396 | WP_013041572.1 | CopG family transcriptional regulator | - |
| SJA_RS19660 () | 21915..22877 | + | 963 | WP_013041573.1 | tyrosine-type recombinase/integrase | - |
| SJA_RS19665 () | 22874..23494 | - | 621 | WP_013041574.1 | histidine phosphatase family protein | - |
| SJA_RS19670 () | 23504..23785 | - | 282 | WP_004212931.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| SJA_RS19675 () | 23772..24038 | - | 267 | WP_004212930.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|