MGE detailed information
MGE type: Prophage MGE length: 34375 bp
Accession: NC_010513 Location: 446909..481283 Organism: Xylella fastidiosa M12 Replicon: chromosome
Accession: NC_010513 Location: 446909..481283 Organism: Xylella fastidiosa M12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFASM12_RS01845 () | 442276..442998 | + | 723 | WP_004085191.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| XFASM12_RS01850 () | 443346..445823 | + | 2478 | WP_012337634.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| XFASM12_RS01855 () | 445808..446470 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| XFASM12_RS01860 () | 446475..446912 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| XFASM12_RS01865 () | 446930..448678 | + | 1749 | WP_004085187.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| XFASM12_RS01870 () | 448675..449694 | + | 1020 | WP_004085186.1 | Tetraacyldisaccharide 4'-kinase | VF |
| XFASM12_RS01875 () | 450069..451151 | - | 1083 | WP_012337635.1 | phage late control D family protein | - |
| XFASM12_RS01880 () | 451142..451360 | - | 219 | WP_004085341.1 | tail protein X | - |
| XFASM12_RS01885 () | 451357..451839 | - | 483 | WP_012337636.1 | phage tail protein | - |
| XFASM12_RS01890 () | 451836..454055 | - | 2220 | WP_012337637.1 | phage tail tape measure protein | - |
| XFASM12_RS01895 () | 454182..454469 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| XFASM12_RS01900 () | 454472..454981 | - | 510 | WP_012337639.1 | phage major tail tube protein | - |
| XFASM12_RS01905 () | 454981..456159 | - | 1179 | WP_012337640.1 | phage tail sheath family protein | - |
| XFASM12_RS01910 () | 456223..457815 | - | 1593 | WP_012337641.1 | tail fiber domain-containing protein | - |
| XFASM12_RS01915 () | 457823..458380 | - | 558 | WP_012337642.1 | phage tail protein I | - |
| XFASM12_RS01920 () | 458373..459266 | - | 894 | WP_012337643.1 | baseplate J/gp47 family protein | - |
| XFASM12_RS01925 () | 459266..459604 | - | 339 | WP_004088650.1 | GPW/gp25 family protein | - |
| XFASM12_RS01930 () | 459712..459993 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| XFASM12_RS01935 () | 460005..460304 | + | 300 | WP_004087025.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| XFASM12_RS01940 () | 460361..460642 | + | 282 | WP_004085174.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFASM12_RS01945 () | 460653..460928 | + | 276 | WP_012337645.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| XFASM12_RS01950 () | 460933..461520 | - | 588 | WP_012337646.1 | phage baseplate assembly protein V | - |
| XFASM12_RS01955 () | 461517..462059 | - | 543 | WP_012337647.1 | hypothetical protein | - |
| XFASM12_RS01960 () | 462035..462556 | - | 522 | WP_012337648.1 | hypothetical protein | - |
| XFASM12_RS01965 () | 462553..462876 | - | 324 | WP_012337649.1 | hypothetical protein | - |
| XFASM12_RS01970 () | 462876..463136 | - | 261 | WP_012337650.1 | hypothetical protein | - |
| XFASM12_RS01975 () | 463154..465028 | - | 1875 | WP_012337651.1 | phage major capsid protein | - |
| XFASM12_RS01980 () | 465025..466611 | - | 1587 | WP_012337652.1 | phage portal protein | - |
| XFASM12_RS01985 () | 466608..467156 | - | 549 | WP_012337653.1 | hypothetical protein | - |
| XFASM12_RS01990 () | 467160..469112 | - | 1953 | WP_012337654.1 | phage terminase large subunit family protein | - |
| XFASM12_RS01995 () | 469105..469680 | - | 576 | WP_012337655.1 | terminase small subunit | - |
| XFASM12_RS02000 () | 469811..470035 | - | 225 | WP_012337656.1 | hypothetical protein | - |
| XFASM12_RS02005 () | 470037..470498 | - | 462 | WP_012337657.1 | hypothetical protein | - |
| XFASM12_RS02010 () | 470488..470817 | - | 330 | WP_012337658.1 | phage holin family protein | - |
| XFASM12_RS02015 () | 470810..471310 | - | 501 | WP_012337659.1 | lysozyme | - |
| XFASM12_RS02020 () | 471410..472141 | - | 732 | WP_012337660.1 | site-specific DNA-methyltransferase | - |
| XFASM12_RS02025 () | 472331..472666 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| XFASM12_RS02030 () | 472663..472917 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| XFASM12_RS02035 () | 472970..473692 | - | 723 | WP_012337661.1 | hypothetical protein | - |
| XFASM12_RS12470 () | 473635..473982 | - | 348 | WP_162010044.1 | hypothetical protein | - |
| XFASM12_RS02040 () | 474230..475438 | + | 1209 | Protein_375 | DNA polymerase | - |
| XFASM12_RS02045 () | 475435..475713 | + | 279 | WP_012337663.1 | VRR-NUC domain-containing protein | - |
| XFASM12_RS02050 () | 475715..476020 | - | 306 | WP_012337664.1 | hypothetical protein | - |
| XFASM12_RS02055 () | 476105..477523 | + | 1419 | WP_012337665.1 | DEAD/DEAH box helicase | - |
| XFASM12_RS02060 () | 477520..477765 | + | 246 | WP_012337666.1 | DUF4224 domain-containing protein | - |
| XFASM12_RS02065 () | 477765..478784 | + | 1020 | WP_012337667.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFASM12_RS02070 () | 479561..480202 | + | 642 | WP_004085684.1 | hypothetical protein | VF |
| XFASM12_RS02075 () | 480230..480706 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| XFASM12_RS02080 () | 480711..481283 | + | 573 | WP_004085682.1 | YceI family protein | - |
| XFASM12_RS02085 () | 481280..483238 | + | 1959 | WP_038231298.1 | phospholipase D family protein | - |
| XFASM12_RS11145 () | 484222..484614 | - | 393 | WP_071869548.1 | helix-turn-helix domain-containing protein | - |
| XFASM12_RS11150 () | 484948..485212 | + | 265 | Protein_386 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|