MGE detailed information
MGE type: Genomic_island MGE length: 18028 bp
Accession: NC_010278 Location: 1913969..1931996 Organism: Actinobacillus pleuropneumoniae serovar 3 str. JL03 Replicon: chromosome
Accession: NC_010278 Location: 1913969..1931996 Organism: Actinobacillus pleuropneumoniae serovar 3 str. JL03 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APJL_RS08820 (APJL_1748) | 1909633..1909905 | - | 273 | WP_005599206.1 | PTS sugar transporter subunit IIB | - |
| APJL_RS08825 (APJL_1749) | 1910208..1910621 | + | 414 | WP_005599209.1 | preprotein translocase subunit SecE | - |
| APJL_RS08830 (APJL_1750) | 1910623..1911186 | + | 564 | WP_005599210.1 | transcription termination/antitermination protein NusG | - |
| APJL_RS08835 (APJL_1751) | 1911516..1911902 | + | 387 | WP_080517108.1 | 50S ribosomal protein L11 | - |
| APJL_RS08840 (APJL_1752) | 1911907..1912596 | + | 690 | WP_012263367.1 | 50S ribosomal protein L1 | - |
| APJL_RS08845 (APJL_1753) | 1912885..1913376 | + | 492 | Protein_1695 | 50S ribosomal protein L10 | - |
| APJL_RS08850 (APJL_1755) | 1913437..1913805 | + | 369 | WP_005599214.1 | 50S ribosomal protein L7/L12 | - |
| APJL_RS08855 (APJL_1756) | 1913969..1914241 | + | 273 | WP_005599215.1 | helix-turn-helix transcriptional regulator | - |
| APJL_RS08860 (APJL_1757) | 1914246..1915502 | + | 1257 | WP_005613295.1 | type II toxin-antitoxin system HipA family toxin | - |
| APJL_RS08865 (APJL_1758) | 1915660..1915878 | + | 219 | WP_005599219.1 | hypothetical protein | - |
| APJL_RS08870 (APJL_1759) | 1915937..1916428 | + | 492 | WP_005602529.1 | hypothetical protein | - |
| APJL_RS08875 (APJL_1760) | 1916503..1916817 | + | 315 | WP_005602530.1 | hypothetical protein | - |
| APJL_RS08880 (APJL_1761) | 1916833..1917699 | + | 867 | WP_043947976.1 | hypothetical protein | - |
| APJL_RS08885 (APJL_1762) | 1918000..1922028 | + | 4029 | WP_012263369.1 | DNA-directed RNA polymerase subunit beta | - |
| APJL_RS08890 (APJL_1763) | 1922154..1926425 | + | 4272 | WP_012263370.1 | DNA-directed RNA polymerase subunit beta' | - |
| APJL_RS08895 (APJL_1764) | 1926587..1928002 | + | 1416 | WP_005605761.1 | AAA family ATPase | - |
| APJL_RS08900 (APJL_1765) | 1927995..1928567 | + | 573 | WP_012263371.1 | hypothetical protein | - |
| APJL_RS10920 | 1928940..1929080 | - | 141 | WP_005602535.1 | hypothetical protein | - |
| APJL_RS08905 (APJL_1766) | 1929188..1929418 | + | 231 | WP_005616131.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| APJL_RS08910 (APJL_1767) | 1929418..1929816 | + | 399 | WP_012263372.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| APJL_RS08915 (APJL_1768) | 1929952..1930368 | - | 417 | WP_012263373.1 | DUF417 family protein | - |
| APJL_RS08920 (APJL_1769) | 1930614..1931264 | + | 651 | WP_012263374.1 | DUF2202 domain-containing protein | - |
| APJL_RS08925 (APJL_1770) | 1931337..1931996 | - | 660 | WP_005605767.1 | hypothetical protein | - |
| APJL_RS08930 (APJL_1771) | 1932310..1933632 | - | 1323 | WP_012263375.1 | HslU--HslV peptidase ATPase subunit | - |
| APJL_RS08935 (APJL_1772) | 1933898..1934419 | - | 522 | WP_005618211.1 | ATP-dependent protease subunit HslV | - |
| APJL_RS08940 (APJL_1773) | 1934497..1935210 | - | 714 | WP_012263376.1 | DNA/RNA nuclease SfsA | - |
| APJL_RS08945 (APJL_1774) | 1935517..1935909 | - | 393 | WP_005605776.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Actinobacillus pleuropneumoniae strain ORG1224 | Genomic island | TA110379 | NZ_CP031854 | 1917281..1935308 | 0 | |
| Actinobacillus pleuropneumoniae strain HS143 | Genomic island | TA110403 | NZ_CP031859 | 1917117..1934880 | 0.001 | |
| Actinobacillus pleuropneumoniae strain S1421 | Genomic island | TA110460 | NZ_CP031874 | 1907375..1925402 | 0 | |
| Actinobacillus pleuropneumoniae strain SC1810 | Genomic island | TA196745 | NZ_CP071698 | 1994992..2013020 | 0 |