MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 83224 bp
Accession: NC_009661 Location: 1..83224 Organism: Shewanella baltica OS185 Replicon: plasmid pS18501
Accession: NC_009661 Location: 1..83224 Organism: Shewanella baltica OS185 Replicon: plasmid pS18501
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SHEW185_RS22640 () | 14..385 | + | 372 | WP_011979480.1 | TIR domain-containing protein | - |
| SHEW185_RS22645 () | 397..1371 | + | 975 | WP_011979481.1 | caspase family protein | - |
| SHEW185_RS22650 () | 2214..2942 | + | 729 | WP_011979482.1 | hypothetical protein | - |
| SHEW185_RS22655 () | 3187..3816 | - | 630 | WP_011979483.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| SHEW185_RS22660 () | 4059..4328 | + | 270 | WP_011979484.1 | hypothetical protein | - |
| SHEW185_RS22665 () | 4417..4836 | + | 420 | WP_080514264.1 | Tn3 family transposase ISPsy42 | Transposase |
| SHEW185_RS22670 () | 5103..5477 | - | 375 | WP_011979485.1 | hypothetical protein | - |
| SHEW185_RS22675 () | 5474..6043 | - | 570 | WP_011839979.1 | hypothetical protein | VF |
| SHEW185_RS22680 () | 6732..7304 | - | 573 | WP_011979486.1 | hypothetical protein | - |
| SHEW185_RS22690 () | 7426..8585 | + | 1160 | WP_086012318.1 | IS3 family transposase ISSba3 | Transposase |
| SHEW185_RS22695 () | 8558..10060 | - | 1503 | WP_011979488.1 | hypothetical protein | - |
| SHEW185_RS22700 () | 10310..10588 | + | 279 | WP_157600332.1 | hypothetical protein | - |
| SHEW185_RS22705 () | 10735..11355 | + | 621 | WP_011979489.1 | DUF2913 family protein | - |
| SHEW185_RS22710 () | 11448..11720 | + | 273 | WP_011979490.1 | hypothetical protein | - |
| SHEW185_RS22715 () | 12047..12289 | + | 243 | WP_011979491.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| SHEW185_RS22720 () | 12279..12563 | + | 285 | WP_011979492.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SHEW185_RS22725 () | 12762..13685 | + | 924 | WP_011979493.1 | IS5 family transposase ISSod12 | Transposase |
| SHEW185_RS22730 () | 13889..14917 | + | 1029 | WP_011979494.1 | IS110 family transposase ISSba8 | Transposase |
| SHEW185_RS22745 () | 16377..17416 | - | 1040 | Protein_19 | IS3 family transposase ISSde6 | Transposase |
| SHEW185_RS22755 () | 17500..17715 | + | 216 | Protein_20 | AAA family ATPase | - |
| SHEW185_RS22760 () | 17989..18861 | + | 873 | WP_011979497.1 | IS30 family transposase ISPlu1 | Transposase |
| SHEW185_RS22765 () | 18998..20953 | + | 1956 | WP_011979498.1 | hypothetical protein | - |
| SHEW185_RS23530 () | 21095..21654 | + | 560 | Protein_23 | IS3 family transposase ISSba5 | Transposase |
| SHEW185_RS22775 () | 21807..22499 | + | 693 | WP_011979499.1 | IS6 family transposase ISSba18 | Transposase |
| SHEW185_RS22780 () | 22661..23524 | + | 864 | WP_011979500.1 | hypothetical protein | - |
| SHEW185_RS22785 () | 23758..24366 | + | 609 | WP_011979501.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| SHEW185_RS22795 () | 25341..26087 | + | 747 | WP_157600333.1 | hypothetical protein | - |
| SHEW185_RS22800 () | 26259..26456 | + | 198 | WP_041411646.1 | hypothetical protein | - |
| SHEW185_RS22805 () | 26459..26947 | + | 489 | WP_011979504.1 | hypothetical protein | - |
| SHEW185_RS22815 () | 27821..28980 | + | 1160 | WP_086012318.1 | IS3 family transposase ISSba3 | Transposase |
| SHEW185_RS22820 () | 28987..29211 | + | 225 | Protein_31 | S24 family peptidase | - |
| SHEW185_RS22825 () | 29199..30455 | + | 1257 | WP_006087354.1 | Y-family DNA polymerase | - |
| SHEW185_RS22835 () | 30975..31706 | + | 732 | WP_011979505.1 | endonuclease | - |
| SHEW185_RS22840 () | 31721..31954 | + | 234 | WP_011979506.1 | hypothetical protein | - |
| SHEW185_RS22845 () | 32345..34225 | + | 1881 | WP_011979507.1 | ParB/RepB/Spo0J family partition protein | - |
| SHEW185_RS22850 () | 34350..34805 | + | 456 | WP_011979508.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| SHEW185_RS22855 () | 34807..35295 | + | 489 | WP_011979509.1 | hypothetical protein | - |
| SHEW185_RS22860 () | 35326..35547 | + | 222 | WP_011979510.1 | hypothetical protein | - |
| SHEW185_RS22865 () | 36223..36846 | + | 624 | WP_012589009.1 | hypothetical protein | - |
| SHEW185_RS22870 () | 36848..37249 | + | 402 | WP_011979512.1 | hypothetical protein | - |
| SHEW185_RS22875 () | 37619..37912 | + | 294 | WP_011979513.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| SHEW185_RS22880 () | 37893..38402 | + | 510 | WP_011979514.1 | GNAT family N-acetyltransferase | Toxin Detail |
| SHEW185_RS22885 () | 38515..38742 | + | 228 | WP_011979515.1 | hypothetical protein | Antitoxin Detail |
| SHEW185_RS22890 () | 39317..40315 | + | 999 | WP_011979516.1 | DUF1738 domain-containing protein | - |
| SHEW185_RS22895 () | 40364..40663 | + | 300 | WP_011979517.1 | hypothetical protein | - |
| SHEW185_RS22900 () | 41221..41580 | + | 360 | WP_006087379.1 | hypothetical protein | - |
| SHEW185_RS22905 () | 41601..47561 | - | 5961 | WP_011979518.1 | hypothetical protein | Relaxase |
| SHEW185_RS22910 () | 47620..47799 | - | 180 | WP_041411649.1 | thyroid hormone receptor interactor 11-like protein | - |
| SHEW185_RS22915 () | 47813..49939 | - | 2127 | WP_011979519.1 | type IV conjugative transfer system coupling protein TraD | - |
| SHEW185_RS22920 () | 49942..50475 | - | 534 | WP_011979520.1 | hypothetical protein | - |
| SHEW185_RS22925 () | 50513..53323 | - | 2811 | WP_011979521.1 | conjugal transfer mating pair stabilization protein TraG | - |
| SHEW185_RS22930 () | 53326..54714 | - | 1389 | WP_011979522.1 | conjugal transfer protein TraH | - |
| SHEW185_RS23965 () | 54711..54887 | - | 177 | WP_181879260.1 | hypothetical protein | - |
| SHEW185_RS22935 () | 54897..55340 | - | 444 | WP_011979523.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| SHEW185_RS22940 () | 55337..56074 | - | 738 | WP_006087389.1 | hypothetical protein | - |
| SHEW185_RS22945 () | 56110..56985 | - | 876 | WP_011979524.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| SHEW185_RS22950 () | 56982..58796 | - | 1815 | WP_011979525.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| SHEW185_RS22955 () | 58793..59530 | - | 738 | WP_011979526.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| SHEW185_RS22960 () | 59553..60566 | - | 1014 | WP_011979527.1 | conjugal transfer pilus assembly protein TraU | - |
| SHEW185_RS22965 () | 60553..61257 | - | 705 | WP_011979528.1 | type-F conjugative transfer system protein TraW | - |
| SHEW185_RS22970 () | 61254..61625 | - | 372 | WP_011979529.1 | TrbI F-type domain-containing protein | - |
| SHEW185_RS22975 () | 61627..64215 | - | 2589 | WP_011979530.1 | type IV secretion system protein TraC | - |
| SHEW185_RS22980 () | 64219..64662 | - | 444 | WP_011979531.1 | type IV conjugative transfer system lipoprotein TraV | - |
| SHEW185_RS22985 () | 64695..66221 | - | 1527 | WP_011979532.1 | conjugal transfer protein TraB | - |
| SHEW185_RS22990 () | 66218..67036 | - | 819 | WP_011979533.1 | type-F conjugative transfer system secretin TraK | - |
| SHEW185_RS22995 () | 67036..67602 | - | 567 | WP_011979534.1 | type IV conjugative transfer system protein TraE | - |
| SHEW185_RS23000 () | 67643..67945 | - | 303 | WP_011979535.1 | type IV conjugative transfer system protein TraL | - |
| SHEW185_RS23005 () | 67949..68320 | - | 372 | WP_011979536.1 | hypothetical protein | - |
| SHEW185_RS23015 () | 68802..69134 | - | 333 | WP_006087329.1 | helix-turn-helix domain-containing protein | - |
| SHEW185_RS23020 () | 69255..69515 | + | 261 | WP_006087330.1 | hypothetical protein | - |
| SHEW185_RS23025 () | 69924..70655 | + | 732 | WP_006087331.1 | hypothetical protein | - |
| SHEW185_RS23030 () | 71317..71544 | - | 228 | WP_014358140.1 | hypothetical protein | - |
| SHEW185_RS23035 () | 71713..72912 | + | 1200 | WP_011979538.1 | hypothetical protein | VF |
| SHEW185_RS23040 () | 72912..74009 | + | 1098 | WP_011979539.1 | chromosome partitioning protein ParB | - |
| SHEW185_RS23045 () | 74448..75074 | + | 627 | WP_172837314.1 | FRG domain-containing protein | - |
| SHEW185_RS23055 () | 75500..77527 | + | 2028 | WP_011979541.1 | type I restriction-modification system subunit M | - |
| SHEW185_RS23060 () | 77524..78690 | + | 1167 | WP_011979542.1 | restriction endonuclease subunit S | - |
| SHEW185_RS23065 () | 78687..81926 | + | 3240 | WP_011979543.1 | type I restriction endonuclease subunit R | - |
| SHEW185_RS23070 () | 81931..83199 | + | 1269 | WP_011979544.1 | ISL3 family transposase ISKpn25 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|