MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 103307 bp
Accession: NC_005230 Location: 1..103307 Organism: Synechocystis sp. PCC 6803 (Synechocystis PCC6803) Replicon: plasmid pSYSA
Accession: NC_005230 Location: 1..103307 Organism: Synechocystis sp. PCC 6803 (Synechocystis PCC6803) Replicon: plasmid pSYSA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SGL_RS00635 () | 706..1287 | - | 582 | WP_011153671.1 | IS701 family transposase ISAcma24 | Transposase |
| SGL_RS00640 () | 1399..1827 | - | 429 | WP_011153672.1 | type II toxin-antitoxin system VapC family toxin | - |
| SGL_RS00645 () | 1799..2032 | - | 234 | WP_011153673.1 | DNA-binding protein | - |
| SGL_RS00650 () | 2399..2965 | + | 567 | WP_011153674.1 | site-specific integrase | - |
| SGL_RS00655 () | 3041..3364 | - | 324 | WP_011153675.1 | toxin-antitoxin system HicB family antitoxin | - |
| SGL_RS00660 () | 3367..3819 | - | 453 | WP_048908403.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| SGL_RS00665 () | 4241..5257 | + | 1017 | WP_011153677.1 | IS4 family transposase IS4Sa | Transposase |
| SGL_RS00670 () | 5340..6284 | - | 945 | WP_011153678.1 | WYL domain-containing protein | - |
| SGL_RS00675 () | 6349..8517 | + | 2169 | WP_011153679.1 | type I-D CRISPR-associated helicase Cas3' | - |
| SGL_RS00680 () | 8531..11458 | + | 2928 | WP_011153680.1 | type I-D CRISPR-associated protein Cas10d/Csc3 | - |
| SGL_RS00685 () | 11524..12513 | + | 990 | WP_011153681.1 | type I-D CRISPR-associated protein Cas7/Csc2 | - |
| SGL_RS00690 () | 12674..13438 | + | 765 | WP_011153682.1 | type I-D CRISPR-associated protein Cas5/Csc1 | - |
| SGL_RS00695 () | 13441..14229 | + | 789 | WP_011153683.1 | CRISPR-associated endoribonuclease Cas6 | - |
| SGL_RS00700 () | 14222..14794 | + | 573 | WP_011153684.1 | CRISPR-associated protein Cas4 | - |
| SGL_RS00705 () | 14804..15781 | + | 978 | WP_011153685.1 | type I-D CRISPR-associated endonuclease Cas1 | - |
| SGL_RS00710 () | 15813..16097 | + | 285 | WP_011153686.1 | CRISPR-associated endonuclease Cas2 | - |
| SGL_RS00715 () | 20266..22182 | + | 1917 | WP_011153692.1 | hypothetical protein | - |
| SGL_RS00720 () | 22328..24058 | + | 1731 | WP_011153693.1 | DUF262 domain-containing HNH endonuclease family protein | - |
| SGL_RS00725 () | 24079..24495 | + | 417 | WP_011153694.1 | hypothetical protein | - |
| SGL_RS00730 () | 24509..24886 | + | 378 | WP_011153695.1 | hypothetical protein | - |
| SGL_RS00735 () | 24925..25509 | - | 585 | WP_011153696.1 | hypothetical protein | - |
| SGL_RS00740 () | 25975..26195 | - | 221 | Protein_22 | hypothetical protein | - |
| SGL_RS00745 () | 26352..27608 | - | 1257 | WP_011153697.1 | hypothetical protein | - |
| SGL_RS00750 () | 27605..28630 | - | 1026 | WP_011153698.1 | MoxR family ATPase | - |
| SGL_RS00755 () | 28850..29353 | - | 504 | WP_011153699.1 | GNAT family N-acetyltransferase | - |
| SGL_RS00760 () | 29337..29639 | - | 303 | WP_011153700.1 | DUF1778 domain-containing protein | - |
| SGL_RS18535 () | 29928..30142 | - | 215 | Protein_27 | hypothetical protein | - |
| SGL_RS00770 () | 30352..30669 | + | 318 | WP_011153701.1 | DUF86 domain-containing protein | - |
| SGL_RS00775 () | 30699..31040 | - | 342 | WP_011153702.1 | DUF5615 family PIN-like protein | - |
| SGL_RS00780 () | 31037..31369 | - | 333 | WP_011153703.1 | DUF433 domain-containing protein | - |
| SGL_RS19375 () | 31422..31595 | + | 174 | WP_158299052.1 | hypothetical protein | - |
| SGL_RS19380 () | 31641..31790 | - | 150 | WP_158299053.1 | hypothetical protein | - |
| SGL_RS00785 () | 31822..32097 | + | 276 | WP_011153704.1 | hypothetical protein | - |
| SGL_RS00790 () | 32289..32483 | + | 195 | WP_011153705.1 | hypothetical protein | - |
| SGL_RS00795 () | 32647..35523 | + | 2877 | WP_011153706.1 | DUF3854 domain-containing protein | - |
| SGL_RS00800 () | 35891..36178 | - | 288 | WP_011153707.1 | putative addiction module antidote protein | Antitoxin Detail |
| SGL_RS00805 () | 36189..36479 | - | 291 | WP_011153708.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SGL_RS00810 () | 36597..36848 | + | 252 | WP_011153709.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| SGL_RS00815 () | 36839..37201 | + | 363 | WP_011153710.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| SGL_RS00820 () | 37267..37521 | - | 255 | WP_011153711.1 | DUF1819 family protein | - |
| SGL_RS00825 () | 37554..38138 | - | 585 | WP_011153712.1 | hypothetical protein | - |
| SGL_RS00830 () | 38131..38712 | - | 582 | WP_011153713.1 | hypothetical protein | - |
| SGL_RS00845 () | 40245..40550 | - | 306 | WP_071822682.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| SGL_RS00850 () | 40637..41368 | - | 732 | WP_011153716.1 | DUF4386 domain-containing protein | - |
| SGL_RS00855 () | 41419..41640 | - | 222 | WP_011153717.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| SGL_RS00860 () | 41845..42492 | + | 648 | WP_011153718.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| SGL_RS00865 () | 43053..43646 | - | 594 | WP_011153719.1 | hypothetical protein | - |
| SGL_RS19385 () | 44249..44419 | - | 171 | WP_158299054.1 | hypothetical protein | - |
| SGL_RS00880 () | 44777..45019 | - | 243 | WP_011153722.1 | Rho termination factor N-terminal domain-containing protein | - |
| SGL_RS00885 () | 45058..45630 | + | 573 | WP_011153723.1 | helix-turn-helix domain-containing protein | - |
| SGL_RS00890 () | 45712..46254 | - | 543 | WP_011153724.1 | hypothetical protein | - |
| SGL_RS00900 () | 47529..48242 | + | 714 | WP_011153726.1 | HNH endonuclease | - |
| SGL_RS18545 () | 48431..48733 | + | 303 | WP_011153727.1 | HNH endonuclease | - |
| SGL_RS00905 () | 48790..49434 | + | 645 | WP_011153728.1 | MerR family transcriptional regulator | - |
| SGL_RS00910 () | 49431..51197 | + | 1767 | WP_011153729.1 | macro domain-containing protein | - |
| SGL_RS00915 () | 51537..52805 | + | 1269 | WP_011153730.1 | TIGR02221 family CRISPR-associated protein | - |
| SGL_RS00920 () | 52881..53996 | - | 1116 | WP_011153731.1 | hypothetical protein | - |
| SGL_RS00925 () | 54005..56392 | - | 2388 | WP_011153732.1 | TIGR03986 family CRISPR-associated RAMP protein | - |
| SGL_RS00930 () | 56394..56975 | - | 582 | WP_011153733.1 | TIGR03984 family CRISPR-associated protein | - |
| SGL_RS00935 () | 56954..58522 | - | 1569 | WP_011153734.1 | hypothetical protein | - |
| SGL_RS00940 () | 58527..60902 | - | 2376 | WP_011153735.1 | hypothetical protein | - |
| SGL_RS00945 () | 60905..62581 | - | 1677 | WP_011153736.1 | hypothetical protein | - |
| SGL_RS00950 () | 62908..64011 | + | 1104 | WP_011153737.1 | CRISPR-associated endoribonuclease Cas6 | - |
| SGL_RS00955 () | 64005..64319 | - | 315 | WP_011153738.1 | hypothetical protein | - |
| SGL_RS00960 () | 64316..64690 | - | 375 | WP_011153739.1 | hypothetical protein | - |
| SGL_RS00965 () | 64822..65832 | + | 1011 | WP_011153740.1 | CRISPR-associated endonuclease Cas1 | - |
| SGL_RS00970 () | 65842..66123 | + | 282 | WP_011153741.1 | CRISPR-associated endonuclease Cas2 | - |
| SGL_RS00975 () | 66223..66567 | + | 345 | WP_011153742.1 | hypothetical protein | - |
| SGL_RS00980 () | 66610..66906 | - | 297 | WP_011153743.1 | hemolysin XhlA family protein | - |
| SGL_RS00985 () | 66936..67976 | - | 1041 | WP_011153744.1 | hypothetical protein | - |
| SGL_RS00990 () | 72878..73459 | - | 582 | WP_011153746.1 | hypothetical protein | VF |
| SGL_RS00995 () | 73483..74928 | - | 1446 | WP_011153747.1 | TIGR03985 family CRISPR-associated protein | - |
| SGL_RS01000 () | 75157..76089 | + | 933 | WP_011153748.1 | hypothetical protein | - |
| SGL_RS01005 () | 76204..77592 | + | 1389 | WP_011153749.1 | hypothetical protein | - |
| SGL_RS01010 () | 77632..78591 | + | 960 | WP_011153750.1 | hypothetical protein | - |
| SGL_RS01015 () | 78642..79775 | + | 1134 | WP_011153751.1 | hypothetical protein | - |
| SGL_RS01020 () | 79821..80048 | + | 228 | WP_011153752.1 | hypothetical protein | - |
| SGL_RS01025 () | 80203..81933 | - | 1731 | WP_011153753.1 | hypothetical protein | - |
| SGL_RS01030 () | 82196..82591 | - | 396 | WP_011153754.1 | hypothetical protein | - |
| SGL_RS01035 () | 82630..83409 | - | 780 | WP_041428283.1 | type III-B CRISPR module RAMP protein Cmr4 | - |
| SGL_RS01040 () | 83501..83881 | + | 381 | WP_011153756.1 | peptidase | - |
| SGL_RS01045 () | 83905..85017 | - | 1113 | WP_011153757.1 | type III-B CRISPR module-associated protein Cmr3 | - |
| SGL_RS01050 () | 85199..88138 | - | 2940 | WP_011153758.1 | type III-B CRISPR-associated protein Cas10/Cmr2 | - |
| SGL_RS01055 () | 88262..88630 | + | 369 | WP_011153759.1 | hypothetical protein | - |
| SGL_RS01060 () | 88627..89616 | + | 990 | WP_011153760.1 | CRISPR-associated endonuclease Cas1 | - |
| SGL_RS01065 () | 89620..89898 | + | 279 | WP_011153761.1 | CRISPR-associated endonuclease Cas2 | - |
| SGL_RS19390 () | 93076..93216 | + | 141 | WP_158299055.1 | hypothetical protein | - |
| SGL_RS01070 () | 93265..93654 | + | 390 | WP_011153762.1 | hypothetical protein | - |
| SGL_RS01075 () | 93673..94188 | + | 516 | WP_011153763.1 | AAA family ATPase | - |
| SGL_RS01080 () | 94198..94611 | + | 414 | WP_011153764.1 | hypothetical protein | - |
| SGL_RS01085 () | 94718..95344 | + | 627 | WP_011153765.1 | alpha-ketoglutarate-dependent dioxygenase AlkB | - |
| SGL_RS01090 () | 95369..96241 | + | 873 | WP_011153766.1 | hypothetical protein | - |
| SGL_RS01095 () | 96348..96938 | + | 591 | WP_011153767.1 | hypothetical protein | - |
| SGL_RS01100 () | 97173..98522 | + | 1350 | WP_011153768.1 | hypothetical protein | - |
| SGL_RS01105 () | 98473..99015 | + | 543 | WP_011153769.1 | hypothetical protein | - |
| SGL_RS01110 () | 99125..100141 | + | 1017 | WP_011153770.1 | family 10 glycosylhydrolase | - |
| SGL_RS01115 () | 100246..100632 | - | 387 | WP_011153771.1 | ATP-binding domain-containing protein | - |
| SGL_RS01120 () | 100781..101628 | + | 848 | Protein_98 | IS630 family transposase ISTcSa | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Synechocystis sp. PCC 6803 | Non-Mobilizable plasmid | TA6113, TA28965 | NC_020287 | 1..100749 | 0 |