MGE detailed information
MGE type: IS/Tn MGE length: 1026 bp
Accession: NC_005126 Location: 4645475..4646500 Organism: Photorhabdus luminescens subsp. laumondii TTO1 Replicon: chromosome
Accession: NC_005126 Location: 4645475..4646500 Organism: Photorhabdus luminescens subsp. laumondii TTO1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PLU_RS19605 (plu3954) | 4641003..4642376 | + | 1374 | WP_011148088.1 | outer membrane channel protein TolC | - |
| PLU_RS19610 (plu3955) | 4642625..4643038 | - | 414 | WP_011148089.1 | DUF2628 domain-containing protein | - |
| PLU_RS19615 (plu3956) | 4643450..4644154 | + | 705 | WP_011148090.1 | DUF1190 family protein | - |
| PLU_RS19620 (plu3957) | 4644161..4645321 | + | 1161 | WP_011148091.1 | glutathionylspermidine synthase family protein | - |
| PLU_RS19625 (plu3958) | 4645475..4646500 | + | 1026 | WP_011146066.1 | IS630 family transposase ISPlu3 | Transposase |
| PLU_RS19630 (plu3959) | 4646891..4647139 | + | 249 | WP_036778328.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| PLU_RS19635 (plu3960) | 4647142..4647417 | + | 276 | WP_011148093.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PLU_RS26930 (plu3961) | 4647431..4647589 | - | 159 | WP_011148094.1 | hypothetical protein | - |
| PLU_RS19640 (plu3962) | 4647656..4648441 | - | 786 | WP_011148095.1 | 4,5-DOPA dioxygenase extradiol | - |
| PLU_RS19645 (plu3963) | 4648636..4649289 | - | 654 | WP_011148096.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| PLU_RS19650 (plu3964) | 4649749..4650039 | + | 291 | WP_011148097.1 | accessory factor UbiK family protein | - |
| PLU_RS19655 (plu3965) | 4650119..4650781 | - | 663 | WP_011148098.1 | DUF799 domain-containing protein | - |
| PLU_RS19660 (plu3966) | 4650778..4651137 | - | 360 | WP_011148099.1 | DUF4810 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Photorhabdus laumondii subsp. laumondii strain DSPV002N | IS/Tn | TA62858 | NZ_CP015281 | 4645473..4646498 | 0.001 | |
| Photorhabdus laumondii subsp. laumondii strain TT01 | IS/Tn | TA89219 | NZ_CP024901 | 4644192..4645217 | 0 |