MGE detailed information
MGE type: Prophage MGE length: 89137 bp
Accession: NC_005126 Location: 4007219..4096355 Organism: Photorhabdus luminescens subsp. laumondii TTO1 Replicon: chromosome
Accession: NC_005126 Location: 4007219..4096355 Organism: Photorhabdus luminescens subsp. laumondii TTO1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PLU_RS16775 (plu3374) | 4002348..4004009 | + | 1662 | WP_011147558.1 | DNA repair protein RecN | - |
| PLU_RS16780 (plu3375) | 4004248..4004595 | + | 348 | WP_011147559.1 | outer membrane protein assembly factor BamE | - |
| PLU_RS16785 (plu3376) | 4004651..4004944 | - | 294 | WP_011147560.1 | RnfH family protein | - |
| PLU_RS16790 (plu3377) | 4004937..4005371 | - | 435 | WP_011147561.1 | type II toxin-antitoxin system RatA family toxin | - |
| PLU_RS16795 (plu3378) | 4005528..4006010 | + | 483 | WP_011147562.1 | SsrA-binding protein SmpB | - |
| PLU_RS16800 (plu3379) | 4006927..4007076 | + | 150 | WP_071824172.1 | helix-turn-helix transcriptional regulator | - |
| PLU_RS16805 (plu3380) | 4007219..4007503 | + | 285 | WP_011147564.1 | type I toxin-antitoxin system SymE family toxin | - |
| PLU_RS16810 (plu3381) | 4007651..4008097 | - | 447 | WP_011147565.1 | tail fiber assembly protein | - |
| PLU_RS24630 (plu3382) | 4008098..4009210 | - | 1113 | WP_082302866.1 | phage tail protein | - |
| PLU_RS16820 (plu3383) | 4009428..4010033 | - | 606 | WP_011147567.1 | DUF2612 domain-containing protein | - |
| PLU_RS16825 (plu3384) | 4010034..4011275 | - | 1242 | WP_041380244.1 | baseplate J/gp47 family protein | - |
| PLU_RS16830 (plu3385) | 4011275..4011631 | - | 357 | WP_011147569.1 | hypothetical protein | - |
| PLU_RS26845 (plu3386) | 4011730..4011903 | - | 174 | WP_011147570.1 | hypothetical protein | - |
| PLU_RS16835 (plu3387) | 4012060..4012593 | - | 534 | WP_011147571.1 | hypothetical protein | - |
| PLU_RS16840 (plu3388) | 4013057..4013656 | - | 600 | WP_109791732.1 | oxidoreductase | - |
| PLU_RS16845 (plu3389) | 4013616..4014512 | - | 897 | WP_011147573.1 | hypothetical protein | - |
| PLU_RS16850 (plu3390) | 4014509..4014814 | - | 306 | WP_011147574.1 | hypothetical protein | - |
| PLU_RS16855 (plu3391) | 4014811..4015632 | - | 822 | WP_011147575.1 | hypothetical protein | - |
| PLU_RS16860 (plu3392) | 4015632..4017749 | - | 2118 | WP_041380246.1 | lytic transglycosylase domain-containing protein | - |
| PLU_RS16865 (plu3393) | 4017958..4018365 | - | 408 | WP_011147577.1 | hypothetical protein | - |
| PLU_RS16870 (plu3394) | 4018365..4018802 | - | 438 | WP_011147578.1 | hypothetical protein | - |
| PLU_RS16875 (plu3395) | 4018802..4020289 | - | 1488 | WP_011147579.1 | DUF3383 domain-containing protein | - |
| PLU_RS16880 (plu3396) | 4020270..4020701 | - | 432 | WP_173362531.1 | hypothetical protein | - |
| PLU_RS16885 (plu3397) | 4020812..4021183 | - | 372 | WP_011147581.1 | hypothetical protein | - |
| PLU_RS16890 (plu3398) | 4021180..4021638 | - | 459 | WP_011147582.1 | hypothetical protein | - |
| PLU_RS16895 (plu3399) | 4021638..4022087 | - | 450 | WP_011147583.1 | DUF4054 domain-containing protein | - |
| PLU_RS16900 (plu3400) | 4022092..4022418 | - | 327 | WP_011147584.1 | hypothetical protein | - |
| PLU_RS16905 (plu3401) | 4022419..4023453 | - | 1035 | WP_011147585.1 | DUF2184 domain-containing protein | - |
| PLU_RS16910 (plu3402) | 4023453..4023929 | - | 477 | WP_011147586.1 | hypothetical protein | - |
| PLU_RS16915 (plu3403) | 4023932..4025257 | - | 1326 | WP_011147587.1 | DUF2213 domain-containing protein | - |
| PLU_RS16920 (plu3404) | 4025275..4025967 | - | 693 | WP_040149365.1 | head morphogenesis protein | - |
| PLU_RS16925 (plu3405) | 4026053..4027477 | - | 1425 | WP_109791985.1 | DUF1073 domain-containing protein | - |
| PLU_RS16930 (plu3406) | 4027536..4028741 | - | 1206 | WP_071824128.1 | PBSX family phage terminase large subunit | - |
| PLU_RS16935 (plu3407) | 4028801..4029520 | - | 720 | WP_011147591.1 | terminase small subunit | - |
| PLU_RS16940 (plu3408) | 4029599..4029916 | - | 318 | WP_011147592.1 | hypothetical protein | - |
| PLU_RS26125 | 4030029..4030867 | + | 839 | Protein_3370 | IS5 family transposase ISPlu7 | Transposase |
| PLU_RS16955 (plu3411) | 4031310..4032209 | - | 900 | WP_011147593.1 | DUF4868 domain-containing protein | - |
| PLU_RS16960 (plu3412) | 4032229..4032747 | - | 519 | WP_011147594.1 | hypothetical protein | - |
| PLU_RS26130 (plu3413) | 4032878..4033327 | - | 450 | WP_011147595.1 | lysis protein | - |
| PLU_RS16970 (plu3414) | 4033420..4033956 | - | 537 | WP_011147596.1 | lysozyme | - |
| PLU_RS16975 (plu3415) | 4033940..4034122 | - | 183 | WP_011147597.1 | phage holin family protein | - |
| PLU_RS25555 (plu3416) | 4034283..4034684 | + | 402 | WP_011147598.1 | hypothetical protein | - |
| PLU_RS16980 (plu3417) | 4034728..4035300 | - | 573 | Protein_3377 | site-specific DNA-methyltransferase | - |
| PLU_RS16985 (plu3418) | 4036101..4036349 | - | 249 | WP_011147600.1 | helix-turn-helix domain-containing protein | - |
| PLU_RS16990 (plu3419) | 4036438..4036692 | - | 255 | WP_041380249.1 | helix-turn-helix domain-containing protein | - |
| PLU_RS16995 (plu3420) | 4036797..4037054 | + | 258 | WP_011147602.1 | helix-turn-helix domain-containing protein | - |
| PLU_RS17000 (plu3421) | 4037155..4037607 | - | 453 | WP_011147603.1 | tail fiber assembly protein | - |
| PLU_RS17005 | 4038283..4038585 | - | 303 | Protein_3382 | phage tail protein | - |
| PLU_RS17010 (plu3423) | 4038587..4039165 | - | 579 | WP_109791986.1 | phage tail protein I | - |
| PLU_RS17015 (plu3424) | 4039155..4040258 | - | 1104 | WP_011147606.1 | baseplate J/gp47 family protein | - |
| PLU_RS17020 (plu3425) | 4040249..4040602 | - | 354 | WP_041380251.1 | GPW/gp25 family protein | - |
| PLU_RS17025 (plu3426) | 4040649..4041254 | - | 606 | WP_011147608.1 | phage baseplate assembly protein V | - |
| PLU_RS17030 (plu3427) | 4041251..4042429 | - | 1179 | WP_011147609.1 | phage late control D family protein | - |
| PLU_RS17035 | 4042417..4042629 | - | 213 | WP_036777198.1 | tail protein X | - |
| PLU_RS17040 (plu3428) | 4042632..4043516 | - | 885 | WP_011147610.1 | phage tail protein | - |
| PLU_RS17045 (plu3429) | 4043516..4046068 | - | 2553 | WP_011147611.1 | phage tail tape measure protein | - |
| PLU_RS27395 | 4046072..4046281 | - | 210 | WP_109791733.1 | GpE family phage tail protein | - |
| PLU_RS17050 (plu3430) | 4046214..4046477 | - | 264 | Protein_3392 | phage tail assembly protein | - |
| PLU_RS17055 (plu3431) | 4046735..4047259 | - | 525 | WP_011147613.1 | phage major tail tube protein | - |
| PLU_RS17060 (plu3432) | 4047259..4048686 | - | 1428 | WP_011147614.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| PLU_RS17065 (plu3433) | 4048676..4048888 | - | 213 | WP_011147615.1 | hypothetical protein | - |
| PLU_RS17070 (plu3434) | 4048885..4049352 | - | 468 | WP_011147616.1 | Gp37 family protein | - |
| PLU_RS17075 (plu3435) | 4049352..4049789 | - | 438 | WP_041380252.1 | DUF1320 domain-containing protein | - |
| PLU_RS17080 (plu3436) | 4049791..4050141 | - | 351 | WP_011147618.1 | DUF2190 family protein | - |
| PLU_RS17085 (plu3437) | 4050155..4051090 | - | 936 | WP_011147619.1 | hypothetical protein | - |
| PLU_RS17090 (plu3438) | 4051122..4052216 | - | 1095 | WP_011147620.1 | hypothetical protein | - |
| PLU_RS17095 (plu3439) | 4052421..4052870 | - | 450 | WP_011147621.1 | phage virion morphogenesis protein | - |
| PLU_RS17100 (plu3440) | 4052863..4053693 | - | 831 | WP_041380253.1 | minor capsid protein | - |
| PLU_RS17105 (plu3441) | 4053674..4055167 | - | 1494 | WP_011147623.1 | DUF935 domain-containing protein | - |
| PLU_RS17110 (plu3442) | 4055167..4056690 | - | 1524 | WP_011147624.1 | hypothetical protein | - |
| PLU_RS17115 (plu3443) | 4056687..4057232 | - | 546 | WP_011147625.1 | DUF3486 family protein | - |
| PLU_RS17120 (plu3444) | 4057232..4057543 | - | 312 | WP_011147626.1 | hypothetical protein | - |
| PLU_RS17125 (plu3445) | 4057536..4057868 | - | 333 | WP_011147627.1 | hypothetical protein | - |
| PLU_RS17130 (plu3446) | 4057865..4058488 | - | 624 | WP_011147628.1 | hypothetical protein | - |
| PLU_RS17135 (plu3447) | 4058478..4059095 | - | 618 | WP_011147629.1 | transglycosylase SLT domain-containing protein | - |
| PLU_RS17140 (plu3448) | 4059098..4059448 | - | 351 | WP_011147630.1 | putative holin | - |
| PLU_RS17145 (plu3449) | 4059699..4060469 | + | 771 | WP_011147631.1 | DNA adenine methylase | - |
| PLU_RS17150 (plu3450) | 4060517..4060954 | - | 438 | WP_011147632.1 | hypothetical protein | - |
| PLU_RS17155 (plu3451) | 4060972..4061337 | - | 366 | WP_125043781.1 | hypothetical protein | - |
| PLU_RS17160 (plu3452) | 4061438..4061782 | - | 345 | WP_041380254.1 | prepilin peptidase | - |
| PLU_RS17165 (plu3453) | 4061818..4062252 | - | 435 | Protein_3415 | helix-turn-helix transcriptional regulator | - |
| PLU_RS17170 (plu3454) | 4062302..4062487 | + | 186 | WP_041380255.1 | DNA-binding protein | - |
| PLU_RS17175 (plu3455) | 4062543..4062851 | + | 309 | WP_011147637.1 | helix-turn-helix domain-containing protein | - |
| PLU_RS27240 (plu3456) | 4062871..4063827 | + | 957 | WP_041380256.1 | hypothetical protein | - |
| PLU_RS17185 (plu3457) | 4063881..4065665 | + | 1785 | WP_011147639.1 | hypothetical protein ; Integrase | Integrase |
| PLU_RS17190 (plu3458) | 4065904..4067076 | + | 1173 | WP_011147640.1 | AAA family ATPase | - |
| PLU_RS17195 (plu3459) | 4067535..4067726 | + | 192 | WP_011147641.1 | hypothetical protein | - |
| PLU_RS17200 (plu3460) | 4067825..4068264 | + | 440 | Protein_3422 | regulatory protein GemA | - |
| PLU_RS17205 (plu3461) | 4068248..4068616 | + | 369 | WP_011147643.1 | DNA-binding protein | - |
| PLU_RS17210 (plu3462) | 4068798..4069265 | - | 468 | Protein_3424 | site-specific DNA-methyltransferase | - |
| PLU_RS25565 (plu3463) | 4069366..4069566 | - | 201 | WP_011147645.1 | hypothetical protein | - |
| PLU_RS17215 | 4069746..4070261 | - | 516 | Protein_3426 | antiterminator | - |
| PLU_RS17220 (plu3467) | 4070249..4070546 | - | 298 | Protein_3427 | hypothetical protein | - |
| PLU_RS17225 (plu3468) | 4070562..4071155 | - | 594 | WP_011147649.1 | DUF1367 family protein | - |
| PLU_RS17230 (plu3469) | 4071256..4072455 | - | 1200 | WP_011147650.1 | XRE family transcriptional regulator | - |
| PLU_RS17235 (plu3470) | 4072471..4073141 | - | 671 | Protein_3430 | hypothetical protein | - |
| PLU_RS17240 (plu3471) | 4073568..4074935 | - | 1368 | WP_011147652.1 | replicative DNA helicase | - |
| PLU_RS17245 (plu3472) | 4074937..4075521 | - | 585 | WP_011147653.1 | ATP-binding protein | - |
| PLU_RS17250 (plu3473) | 4075530..4076282 | - | 753 | WP_011147654.1 | helix-turn-helix domain-containing protein | - |
| PLU_RS17255 (plu3474) | 4076285..4076509 | - | 225 | WP_011147655.1 | hypothetical protein | - |
| PLU_RS17260 (plu3475) | 4076524..4076973 | - | 450 | WP_011147656.1 | hypothetical protein | - |
| PLU_RS17265 (plu3476) | 4077031..4077258 | - | 228 | WP_041380257.1 | helix-turn-helix domain-containing protein | - |
| PLU_RS27400 | 4077399..4077578 | + | 180 | Protein_3437 | hypothetical protein | - |
| PLU_RS17275 (plu3479) | 4078796..4079140 | + | 345 | WP_011147660.1 | hypothetical protein | - |
| PLU_RS17280 (plu3480) | 4079316..4080341 | + | 1026 | WP_011144720.1 | IS630 family transposase ISPlu19 | Transposase |
| PLU_RS27245 (plu3481) | 4080348..4080506 | + | 159 | WP_011147661.1 | hypothetical protein | - |
| PLU_RS17285 (plu3482) | 4080520..4082280 | + | 1761 | WP_011147662.1 | hypothetical protein | - |
| PLU_RS17290 (plu3483) | 4082277..4082774 | + | 498 | WP_011147663.1 | siphovirus Gp157 family protein | - |
| PLU_RS17295 (plu3484) | 4082826..4083014 | + | 189 | WP_011147664.1 | hypothetical protein | - |
| PLU_RS27405 (plu3485) | 4083584..4083754 | + | 171 | WP_011147665.1 | hypothetical protein | - |
| PLU_RS17300 (plu3486) | 4083759..4083974 | + | 216 | WP_011147666.1 | hypothetical protein | - |
| PLU_RS17305 (plu3487) | 4083926..4085109 | + | 1184 | Protein_3446 | Putative defective protein IntQ ; Integrase | Integrase |
| PLU_RS17310 (plu3488) | 4085555..4085770 | - | 216 | WP_049789790.1 | hypothetical protein | - |
| PLU_RS17315 (plu3489) | 4085834..4086064 | + | 231 | WP_011147669.1 | hypothetical protein | - |
| PLU_RS17320 (plu3490) | 4086061..4086330 | + | 270 | WP_011147670.1 | helix-turn-helix domain-containing protein | - |
| PLU_RS17325 (plu3491) | 4086678..4087088 | - | 411 | WP_036808644.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| PLU_RS17330 (plu3492) | 4087142..4087315 | - | 174 | WP_011147672.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| PLU_RS17335 (plu3494) | 4087435..4089083 | - | 1649 | Protein_3452 | hypothetical protein | - |
| PLU_RS17340 (plu3495) | 4089083..4089619 | - | 537 | WP_041380260.1 | hypothetical protein | - |
| PLU_RS17345 (plu3496) | 4089591..4090199 | - | 609 | WP_011147676.1 | hypothetical protein | - |
| PLU_RS17350 (plu3497) | 4090319..4090938 | - | 620 | Protein_3455 | tail fiber assembly protein | - |
| PLU_RS24635 (plu3498) | 4090938..4092725 | - | 1788 | WP_109791737.1 | phage tail protein | - |
| PLU_RS17360 (plu3499) | 4093018..4093423 | - | 406 | Protein_3457 | IS607 family transposase ISLhe9 | Transposase |
| PLU_RS17365 (plu3500) | 4093498..4093867 | + | 370 | Protein_3458 | DUF2938 family protein | - |
| PLU_RS17370 (plu3502) | 4094456..4094743 | - | 288 | WP_011147682.1 | hypothetical protein | - |
| PLU_RS17375 (plu3503) | 4095771..4096355 | - | 585 | WP_011147683.1 | putative protein adenylyltransferase Fic | VF |
| PLU_RS17380 (plu3504) | 4096363..4096845 | - | 483 | WP_011147684.1 | hypothetical protein | - |
| PLU_RS17385 (plu3505) | 4096925..4097455 | - | 531 | WP_011147685.1 | GNAT family N-acetyltransferase | - |
| PLU_RS17390 (plu3506) | 4097665..4098324 | - | 660 | WP_011147686.1 | polymer-forming cytoskeletal protein | - |
| PLU_RS24640 (plu3507) | 4099071..4099475 | - | 405 | WP_011147687.1 | hypothetical protein | - |
| PLU_RS17400 (plu3508) | 4100136..4100411 | + | 276 | WP_011147688.1 | hypothetical protein | - |
| PLU_RS17405 (plu3509) | 4100619..4101074 | + | 456 | WP_011147689.1 | GNAT family N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Photorhabdus laumondii subsp. laumondii strain DSPV002N | Prophage | TA62854 | NZ_CP015281 | 4007649..4096353 | 0 | |
| Photorhabdus laumondii subsp. laumondii strain TT01 | Prophage | TA89215 | NZ_CP024901 | 4007641..4096345 | 0 |