MGE detailed information
MGE type: Mobilizable plasmid MGE length: 24873 bp
Accession: NC_005000 Location: 1..24873 Organism: Enterococcus faecium Replicon: plasmid pRUM
Accession: NC_005000 Location: 1..24873 Organism: Enterococcus faecium Replicon: plasmid pRUM
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HKK39_RS00005 (pRUM_p01) | 1..291 | - | 291 | WP_000026576.1 | hypothetical protein | - |
| HKK39_RS00010 | 427..606 | - | 180 | WP_001021554.1 | hypothetical protein | - |
| HKK39_RS00015 (pRUM_p02) | 603..953 | - | 351 | WP_000568378.1 | hypothetical protein | - |
| HKK39_RS00020 (pRUM_p03) | 946..2271 | - | 1326 | WP_000969590.1 | Y-family DNA polymerase | - |
| HKK39_RS00025 (pRUM_p04) | 2721..3335 | + | 615 | WP_001261742.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| HKK39_RS00030 (pRUM_p05) | 3500..4504 | - | 1005 | WP_000455809.1 | hypothetical protein | - |
| HKK39_RS00035 (pRUM_p06) | 4963..5220 | - | 258 | WP_000588503.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| HKK39_RS00040 (pRUM_p07) | 5213..5482 | - | 270 | WP_000388479.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| HKK39_RS00045 | 5613..5792 | - | 180 | WP_001120991.1 | hypothetical protein | - |
| HKK39_RS00180 | 5808..6008 | - | 201 | WP_001033544.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| HKK39_RS00050 (pRUM_p10) | 6173..6868 | - | 696 | WP_002326819.1 | hypothetical protein | - |
| HKK39_RS00055 (pRUM_p11) | 6930..7535 | + | 606 | Protein_11 | IS6 family transposase IS1216E | Transposase |
| HKK39_RS00060 | 7536..7974 | - | 439 | Protein_12 | replication protein RepA | - |
| HKK39_RS00065 | 7954..8139 | - | 186 | Protein_13 | APH(3') family aminoglycoside O-phosphotransferase | - |
| HKK39_RS00070 (pRUM_p14) | 8232..8774 | - | 543 | WP_000627290.1 | streptothricin N-acetyltransferase Sat4 | - |
| HKK39_RS00075 (pRUM_p16) | 8771..9679 | - | 909 | WP_001255866.1 | Aminoglycoside 6-adenylyltransferase | ARG |
| HKK39_RS00080 (pRUM_p17) | 9712..10446 | - | 735 | WP_000662263.1 | class I SAM-dependent methyltransferase | - |
| HKK39_RS00085 (pRUM_p18) | 10427..11296 | - | 870 | WP_000228166.1 | nucleotidyltransferase domain-containing protein | - |
| HKK39_RS00090 (pRUM_p19) | 11399..11644 | - | 246 | WP_000567888.1 | single-stranded DNA-binding protein | - |
| HKK39_RS00095 (pRUM_p20) | 11680..12345 | - | 666 | Protein_19 | IS1182 family transposase IS1182 | Transposase |
| HKK39_RS00100 | 12508..12768 | - | 261 | Protein_20 | topoisomerase DNA-binding C4 zinc finger domain-containing protein | - |
| HKK39_RS00105 (pRUM_p21) | 12938..13675 | - | 738 | WP_001038792.1 | rRNA adenine N-6-methyltransferase | ARG |
| HKK39_RS00110 | 13800..13883 | - | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| HKK39_RS00115 | 14006..14173 | - | 168 | Protein_23 | peptide-binding protein | - |
| HKK39_RS00120 | 14307..14495 | - | 189 | Protein_24 | topoisomerase C-terminal repeat-containing protein | - |
| HKK39_RS00125 (pRUM_p22) | 14570..15250 | + | 681 | WP_001015311.1 | IS6 family transposase IS1216E | Transposase |
| HKK39_RS00130 (pRUM_p23) | 15306..15854 | + | 549 | Protein_26 | Replication initiation protein | Relaxase |
| HKK39_RS00135 (pRUM_p24) | 15987..17174 | + | 1188 | WP_002296840.1 | IS256 family transposase IS16 | Transposase |
| HKK39_RS00140 (pRUM_p25) | 17464..18111 | + | 648 | WP_000143686.1 | Chloramphenicol acetyltransferase | ARG |
| HKK39_RS00145 (pRUM_p26) | 18426..18824 | + | 399 | WP_002340414.1 | hypothetical protein | Relaxase |
| HKK39_RS00150 (pRUM_p27) | 18806..19171 | + | 366 | Protein_30 | hypothetical protein | Relaxase |
| HKK39_RS00155 (pRUM_p28) | 19246..19926 | + | 681 | WP_002343844.1 | IS6 family transposase IS1216E | Transposase |
| HKK39_RS00160 (pRUM_p29) | 20542..21582 | - | 1041 | WP_000997689.1 | replication initiator protein A | - |
| HKK39_RS00165 (pRUM_p30) | 21931..22257 | - | 327 | WP_000796719.1 | hypothetical protein | - |
| HKK39_RS00170 (pRUM_p31) | 22244..23047 | - | 804 | WP_002311905.1 | Sporulation initiation inhibitor protein Soj | VF |
| HKK39_RS00175 (pRUM_p32) | 23471..24658 | - | 1188 | WP_002296840.1 | IS256 family transposase IS16 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Enterococcus faecium strain AT45b | Mobilizable plasmid | TA244452 | NZ_CP097025 | 1..23514 | 0.006 | |
| Enterococcus faecium isolate E8691 | Non-Mobilizable plasmid | TA288210 | NZ_LR135437 | 1..19194 | 0.007 |