MGE detailed information
MGE type: Prophage MGE length: 20543 bp
Accession: NC_003028 Location: 1063231..1083773 Organism: Streptococcus pneumoniae TIGR4 Replicon: chromosome
Accession: NC_003028 Location: 1063231..1083773 Organism: Streptococcus pneumoniae TIGR4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SP_RS12785 | 1059397..1059768 | + | 372 | WP_001808482.1 | HAD-IB family phosphatase | - |
| SP_RS12790 | 1059809..1060042 | + | 234 | WP_162294823.1 | HAD hydrolase family protein | - |
| SP_RS05580 (SP_1126) | 1060051..1061166 | + | 1116 | WP_000706421.1 | glycerate kinase | - |
| SP_RS05585 (SP_1127) | 1061163..1061609 | - | 447 | WP_000131076.1 | YueI family protein | - |
| SP_RS05590 (SP_1128) | 1061773..1063077 | + | 1305 | WP_000022813.1 | phosphopyruvate hydratase | - |
| SP_RS05595 (SP_1129) | 1063231..1064394 | - | 1164 | WP_001021837.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SP_RS05600 (SP_1130) | 1064469..1065317 | - | 849 | WP_000700645.1 | helix-turn-helix domain-containing protein | - |
| SP_RS05605 (SP_1131) | 1065437..1065790 | + | 354 | WP_000032304.1 | ISNCY family transposase ISH7A | Transposase |
| SP_RS05610 (SP_1132) | 1065890..1066156 | + | 267 | WP_000404762.1 | hypothetical protein | - |
| SP_RS13030 (SP_1133) | 1066167..1066319 | + | 153 | WP_000706985.1 | hypothetical protein | - |
| SP_RS05615 (SP_1134) | 1066524..1067141 | + | 618 | WP_000424676.1 | Rha family transcriptional regulator | - |
| SP_RS05620 (SP_1135) | 1067176..1067628 | + | 453 | WP_000141102.1 | hypothetical protein | - |
| SP_RS05625 (SP_1136) | 1067625..1068071 | + | 447 | WP_000171242.1 | DnaD domain protein | - |
| SP_RS05630 (SP_1137) | 1068083..1068967 | + | 885 | WP_000838905.1 | IS21 family transposase ISSpu5 | Transposase |
| SP_RS05635 (SP_1139) | 1069216..1069866 | + | 651 | WP_000138311.1 | hypothetical protein | - |
| SP_RS05640 (SP_1140) | 1069913..1070341 | + | 429 | WP_000918210.1 | hypothetical protein | - |
| SP_RS05645 (SP_1141) | 1070349..1070660 | + | 312 | WP_001113833.1 | hypothetical protein | - |
| SP_RS05650 (SP_1142) | 1070678..1071088 | + | 411 | WP_000162610.1 | hypothetical protein | - |
| SP_RS05655 (SP_1143) | 1071285..1071650 | + | 366 | WP_000551587.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SP_RS05660 (SP_1144) | 1071640..1071933 | + | 294 | WP_000794247.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| SP_RS05665 (SP_1145) | 1071951..1073141 | + | 1191 | WP_000123149.1 | hypothetical protein | - |
| SP_RS13035 (SP_1146) | 1073144..1073320 | + | 177 | WP_000346914.1 | hypothetical protein | - |
| SP_RS12125 | 1073640..1074086 | - | 447 | WP_061631657.1 | tyrosine-type recombinase/integrase | - |
| SP_RS12130 | 1073986..1074831 | - | 846 | Protein_1067 | IS630 family transposase | - |
| SP_RS12795 | 1075002..1075157 | + | 156 | Protein_1068 | diacylglycerol kinase family lipid kinase | - |
| SP_RS05680 (SP_1151) | 1075357..1078632 | + | 3276 | WP_000772372.1 | ATP-dependent nuclease subunit B | - |
| SP_RS05685 (SP_1152) | 1078629..1082279 | + | 3651 | WP_000767212.1 | helicase-exonuclease AddAB subunit AddA | - |
| SP_RS05690 (SP_1153) | 1082494..1083672 | + | 1179 | WP_000174755.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae strain TVO_TIGR4 | Prophage | TA117442 | NZ_CP035239 | 1063491..1084033 | 0 | |
| Streptococcus pneumoniae TIGR4 | Prophage | TA229787 | NZ_CP089948 | 1063491..1084033 | 0 |