 T4SS ID | 387 |
| Strain | Bordetella parapertussis 12822 |
| Replicon | chromosome [Browse all T4SS(s) in this replicon] |
| Accession | NC_002928 |
| Location | 4640447..4648755 |
| Name | Ptl |
| Function | effector translocation |
| Classification | Type IVA; Type P |
 This T4SS has been mentioned in a genome sequencing report. | |
T4SS components |
| Component | PtlA | PtlB | PtlC | PtlD | PtlI | PtlE | PtlF | PtlG | PtlH |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
The information of T4SS components from NC_002928 | ||||||
  | ||||||
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | BPP4303 | 4636118..4636993 [+], 876 | 33598788 | hypothetical protein | ||
| 2 | BPP4304 (ptxA) | 4637270..4638079 [+], 810 | 33598789 | toxin subunit 1 | ||
| 3 | BPP4306 (ptxD) | 4638793..4639251 [+], 459 | 33598790 | toxin subunit 4 | ||
| 4 | BPP4307 (ptxE) | 4639263..4639625 [+], 363 | 33598791 | toxin subunit 5 | ||
| 5 | BPP4308 (ptxC) | 4639708..4640391 [+], 684 | 33598792 | toxin subunit 3 | ||
| 6 | BPP4309 (ptlA) | 4640447..4640755 [+], 309 | 33598793 | toxin transport protein | PtlA | |
| 7 | BPP4310 (ptlB) | 4640774..4641088 [+], 315 | 33598794 | toxin transport protein | PtlB | |
| 8 | BPP4311 | 4641085..4643559 [+], 2475 | 33598795 | secretion system protein | PtlC | |
| 9 | BPP4312 | 4643567..4644958 [+], 1392 | 33598796 | hypothetical protein | PtlD | |
| 10 | BPP4312A | 4644955..4645140 [+], 186 | 33598797 | secretion system protein | PtlI | |
| 11 | BPP4313 | 4645119..4645820 [+], 702 | 33598798 | secretion system protein | PtlE | |
| 12 | BPP4314 | 4645817..4646638 [+], 822 | 33598799 | secretion system protein | PtlF | |
| 13 | BPP4315 | 4646619..4647743 [+], 1125 | 33598800 | secretion system protein | PtlG | |
| 14 | BPP4316 | 4647736..4648755 [+], 1020 | 33598801 | secretion system protein | PtlH | |
| 15 | BPP4317 | 4648961..4649995 [-], 1035 | 33598802 | hypothetical protein | ||
| 16 | BPP4318 | 4650096..4650887 [+], 792 | 33598803 | AraC family transcription regulator | ||
| 17 | BPP4319 | 4650970..4651344 [+], 375 | 33598804 | hypothetical protein | ||
| 18 | BPP4320 | 4651322..4652731 [+], 1410 | 33598805 | hypothetical protein | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
Effectors |
| PtxA, PtxD, PtxE, PtxC |
The information of protein effectors | ||||||
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | * | |
| 1 | BPP4304 (ptxA) | 4637270..4638079 [+], 810 | 33598789 | toxin subunit 1 | PtxA | |
| 2 | BPP4306 (ptxD) | 4638793..4639251 [+], 459 | 33598790 | toxin subunit 4 | PtxD | |
| 3 | BPP4307 (ptxE) | 4639263..4639625 [+], 363 | 33598791 | toxin subunit 5 | PtxE | |
| 4 | BPP4308 (ptxC) | 4639708..4640391 [+], 684 | 33598792 | toxin subunit 3 | PtxC | |
Download FASTA format files |
| Proteins Genes |
| (1) Parkhill J; Sebaihia M; Preston A; Murphy LD; Thomson N; Harris DE; Holden MT; Churcher CM; Bentley SD; Mungall KL; Cerdeno-Tarraga AM; Temple L; James K; Harris B; Quail MA; Achtman M; Atkin R; Baker S; Basham D; Bason N; Cherevach I; Chillingworth T; Collins M; Cronin A; Davis P; Doggett J; Feltwell T; Goble A; Hamlin N; Hauser H; Holroyd S; Jagels K; Leather S; Moule S; Norberczak H; O'Neil S; Ormond D; Price C; Rabbinowitsch E; Rutter S; Sanders M; Saunders D; Seeger K; Sharp S; Simmonds M; Skelton J; Squares R; Squares S; Stevens K; Unwin L; Whitehead S; Barrell BG; Maskell DJ (2003). Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica. Nat Genet. 35(1):32-40. [PudMed:12910271] |