SecReT4

T4SS
References

T4SS ID	381
Strain	Plasmid pIPO2T
Replicon	plasmid pIPO2T [Browse all T4SS(s) in this replicon]
Accession	NC_003213
Location	17424..33169
Name	VirB
Function	Conjugation
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	1	1	1	1	1	1	1	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_003213

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pIPO2T_p14 (traQ)	12879..13457 [-], 579	16751950	TraQ protein
2	pIPO2T_p15 (traP)	13471..14031 [-], 561	16751949	TraP protein
3	pIPO2T_p16 (traO)	14428..16620 [-], 2193	16751948	TraO protein
4	pIPO2T_p17	16632..17330 [-], 699	16751947	hypothetical 25.4 kDa protein
5	pIPO2T_p18 (traN)	17424..19937 [-], 2514	16751946	TraN protein	VirD4
6	pIPO2T_p19 (traM)	20485..21552 [-], 1068	16751945	TraM protein	VirB11
7	pIPO2T_p20 (traL)	21536..22687 [-], 1152	16751944	TraL protein	VirB10
8	pIPO2T_p21 (traK)	22687..23559 [-], 873	16751943	TraK protein	VirB9
9	pIPO2T_p22 (traJ)	23556..24266 [-], 711	16751942	TraJ protein	VirB8
10	pIPO2T_p23 (traI)	24272..24436 [-], 165	16751941	TraI protein	VirB7
11	pIPO2T_p24 (traH)	24573..25655 [-], 1083	16751940	TraH protein	VirB6
12	pIPO2T_p25 (traG)	25667..25963 [-], 297	16751939	TraG protein
13	pIPO2T_p26 (traF)	26066..26785 [-], 720	16751938	TraF protein	VirB5
14	pIPO2T_p27 (traE)	26791..29271 [-], 2481	16751937	TraE protein	VirB4
15	pIPO2T_p28 (traD)	29278..29601 [-], 324	16751936	TraD protein	VirB3
16	pIPO2T_p29 (traC)	29611..29919 [-], 309	16751935	TraC protein	VirB2
17	pIPO2T_p30 (traB)	30050..32398 [-], 2349	16751934	TraB protein
18	pIPO2T_p31 (traA)	32408..33169 [-], 762	16751933	TraA protein	VirB1
19	pIPO2T_p32	33227..33622 [-], 396	16751932	hypothetical 15.3 kDa protein
20	pIPO2T_p33	34471..35529 [-], 1059	16751969	hypothetical 37 kDa protein
21	pIPO2T_p34	35617..35883 [+], 267	21735069	hypothetical 9.8 kDa protein
22	pIPO2T_p35	35945..36181 [+], 237	21735070	hypothetical 8.5 kDa protein
23	pIPO2T_p36	36190..36606 [+], 417	21735071	hypothetical 16 kDa protein
24	pIPO2T_p37	36603..36740 [+], 138	21735072	hypothetical 5.2 kDa protein
25	pIPO2T_p38	36761..37027 [+], 267	21735073	hypothetical 9.4 kDa protein
26	pIPO2T_p39	37036..37299 [+], 264	21735074	hypothetical 9.3 kDa protein
27	pIPO2T_p40	37316..37540 [+], 225	21735075	hypothetical 8 kDa protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Tauch A; Schneiker S; Selbitschka W; Puhler A; van Overbeek LS; Smalla K; Thomas CM; Bailey MJ; Forney LJ; Weightman A; Ceglowski P; Pembroke T; Tietze E; Schroder G; Lanka E; van Elsas JD (2002). The complete nucleotide sequence and environmental distribution of the cryptic, conjugative, broad-host-range plasmid pIPO2 isolated from bacteria of the wheat rhizosphere. Microbiology. 148(Pt 6):1637-53. [PudMed:12055285]