 T4SS ID | 361 |
| Strain | Xanthomonas axonopodis pv. citri str. 306 |
| Replicon | plasmid pXAC64 [Browse all T4SS(s) in this replicon] |
| Accession | NC_003922 |
| Location | 26776..43196 |
| Name | VirB |
| Function | NA |
| Classification | Type IVA; Type P |
 Experimental investigation has been performed on this T4SS. | |
T4SS components |
| Component | VirB1 | VirB2 | VirB3 | VirB4 | VirB5 | VirB6 | VirB7 | VirB8 | VirB9 |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 |
| Component | VirB10 | VirB11 | VirD4 | ||||||
| Number | 1 | 1 | 1 |
The information of T4SS components from NC_003922 | ||||||
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | XACb0021 | 22034..22621 [-], 588 | 21264249 | hypothetical protein | ||
| 2 | XACb0022 | 22854..23351 [-], 498 | 21264250 | hypothetical protein | ||
| 3 | XACb0023 | 23228..23563 [-], 336 | 21264251 | hypothetical protein | ||
| 4 | XACb0024 | 23560..24006 [-], 447 | 21264252 | hypothetical protein | ||
| 5 | XACb0025 | 24354..24749 [+], 396 | 21264253 | hypothetical protein | ||
| 6 | XACb0026 | 24749..24922 [+], 174 | 21264254 | hypothetical protein | ||
| 7 | XACb0027 | 25064..25336 [-], 273 | 21264255 | hypothetical protein | ||
| 8 | XACb0028 | 25522..25977 [+], 456 | 21264256 | hypothetical protein | ||
| 9 | XACb0029 | 26388..26762 [-], 375 | 21264257 | hypothetical protein | ||
| 10 | XACb0030 (trwB) | 26776..28350 [+], 1575 | 21264258 | TrwB protein | VirD4 | |
| 11 | XACb0031 (trwC) | 28364..31339 [+], 2976 | 21264259 | TrwC protein | ||
| 12 | XACb0032 | 31393..31716 [-], 324 | 21264260 | hypothetical protein | ||
| 13 | XACb0033 | 31716..31934 [-], 219 | 21264261 | hypothetical protein | ||
| 14 | XACb0034 | 32017..32439 [+], 423 | 21264262 | hypothetical protein | ||
| 15 | XACb0035 | 32534..32953 [-], 420 | 21264263 | hypothetical protein | ||
| 16 | XACb0036 (virB1) | 33079..33957 [-], 879 | 21264264 | VirB1 protein | VirB1 | |
| 17 | XACb0037 (virB11) | 33968..34990 [-], 1023 | 21264265 | VirB11 protein | VirB11 | |
| 18 | XACb0038 (virB10) | 35001..36221 [-], 1221 | 21264266 | VirB10 protein | VirB10 | |
| 19 | XACb0039 (virB9) | 36223..37005 [-], 783 | 21264267 | VirB9 protein | VirB9 | |
| 20 | XACb0040 (virB8) | 37030..37704 [-], 675 | 21264268 | VirB8 protein | VirB8 | |
| 21 | XACb0041 (virB6) | 37701..38567 [-], 867 | 21264269 | VirB6 protein | VirB6 | |
| 22 | XACb0042 | 38569..38964 [-], 396 | 21264270 | hypothetical protein | ||
| 23 | XACb0043 | 38942..39190 [-], 249 | 21264271 | hypothetical protein | ||
| 24 | XACb0044 (virB5) | 39202..39864 [-], 663 | 21264272 | VirB5 protein | VirB5 | |
| 25 | XACb0045 (virB4) | 39867..42500 [-], 2634 | 21264273 | VirB4 protein | VirB4 | |
| 26 | XACb0046 (virB3) | 42523..42822 [-], 300 | 21264274 | VirB3 protein | VirB3 | |
| 27 | XACb0047 (virB2) | 42819..43196 [-], 378 | 21264275 | VirB2 protein | VirB2 | |
| 28 | XACb0048 | 43217..43573 [-], 357 | 21264276 | hypothetical protein | ||
| 29 | XACb0049 | 43721..44095 [-], 375 | 21264277 | hypothetical protein | ||
| 30 | XACb0050 | 44220..45026 [-], 807 | 21264278 | ISxac2 transposase | ||
| 31 | XACb0051 | 45020..45286 [-], 267 | 21264279 | ISxac2 transposase | ||
| 32 | XACb0052 | 45641..45970 [-], 330 | 21264280 | partition gene repressor | ||
| 33 | XACb0053 (parB) | 46022..47053 [-], 1032 | 21264281 | partition protein B | ||
| 34 | XACb0054 (parA) | 47067..47834 [-], 768 | 21264282 | partition protein A | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
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(1) Tasic L; Borin PF; Khater LC; Ramos CH (2007). Cloning and characterization of three hypothetical secretion chaperone proteins from Xanthomonas axonopodis pv. citri. Protein Expr Purif. 53(2):363-9. [PudMed:17350859]
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(2) Alegria MC; Souza DP; Andrade MO; Docena C; Khater L; Ramos CH; da Silva AC; Farah CS (2005). Identification of new protein-protein interactions involving the products of the chromosome- and plasmid-encoded type IV secretion loci of the phytopathogen Xanthomonas axonopodis pv. citri. J Bacteriol. 187(7):2315-25. [PudMed:15774874]
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| This literature contains experimental investigation |