T4SS ID231
StrainBartonella clarridgeiae 73
Repliconchromosome [Browse all T4SS(s) in this replicon]
Functioneffector translocation
ClassificationType IVA; Type P
sequence This T4SS has been mentioned in a genome sequencing report.
structure Information of structure: structureBep9

T4SS components

The information of T4SS components from NC_014932
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1BARCL_0637700194..700322 [+], 129319898805hypothetical protein 
2BARCL_0638700354..700560 [-], 207319898806hypothetical protein 
3BARCL_0639700743..702665 [-], 1923319898807Bartonella effector protein (Bep); substrate of VirB T4SS 
4BARCL_0640702829..704481 [-], 1653319898808Bartonella effector protein (Bep); substrate of VirB T4SS 
5BARCL_0641 (virB11)704616..705686 [-], 1071319898809type IV secretion system protein VirB11  VirB11
6BARCL_0642 (virB10)705683..706963 [-], 1281319898810type IV secretion system protein VirB10  VirB10
7BARCL_0643 (virB9)706960..707820 [-], 861319898811type IV secretion system protein VirB9 protein  VirB9
8BARCL_0644 (virB8)707817..708500 [-], 684319898812type IV secretion system protein VirB8  VirB8
9BARCL_0645 (virB7)708475..708801 [-], 327319898813type IV secretion system protein VirB7, 15 kDa Antigen  VirB7
10BARCL_0646 (virB6)708991..709983 [-], 993319898814type IV secretion system protein VirB6  VirB6
11BARCL_0647 (virB5)709989..710459 [-], 471319898815type IV secretion system protein VirB5 ; 17-kDa antigen  VirB5
12BARCL_0648 (virB4)710420..712774 [-], 2355319898816type IV secretion system protein VirB4  VirB4
13BARCL_0649 (virB3)712784..713092 [-], 309319898817type IV secretion system protein VirB3  VirB3
14BARCL_0650 (virB2)713093..713443 [-], 351319898818type IV secretion system protein VirB2  VirB2
15BARCL_0651713795..714559 [+], 765319898819hypothetical protein 
16BARCL_0652 (glnA)714851..716260 [-], 1410319898820glutamine synthetase 
17BARCL_0653 (glnB)716317..716661 [-], 345319898821nitrogen regulatory protein P-II 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes

BepA, BepB, BepA, Bep9

The information of protein effectors
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProduct  *
1BARCL_0635 698179..699882 [-], 1704319898804Bartonella effector protein (Bep); substrate of VirB T4SS  BepA
2BARCL_0639 700743..702665 [-], 1923319898807Bartonella effector protein (Bep); substrate of VirB T4SS  BepB
3BARCL_0640 702829..704481 [-], 1653319898808Bartonella effector protein (Bep); substrate of VirB T4SS  BepA
4BARCL_1032 1147413..1148168 [+], 756319899191Bartonella effector protein (Bep); substrate of VirB T4SSexperimental  Bep9
experimental T4SE derived from experimental literature.

Download FASTA format files
Proteins        Genes
The information on structure of this T4ss

1Bep94YK2 PDB (4YK2)Crystal Structure of the BID Domain of Bep9 from Bartonella clarridgeiae.(1) PubMed: 27889208
(1) Stanger FV et al. (2017). The BID Domain of Type IV Secretion Substrates Forms a Conserved Four-Helix Bundle Topped with a Hook. Structure. 25(1):203-211. [PudMed:27889208] experimental
(1) Engel P; Salzburger W; Liesch M; Chang CC; Maruyama S; Lanz C; Calteau A; Lajus A; Medigue C; Schuster SC; Dehio C (2011). Parallel evolution of a type IV secretion system in radiating lineages of the host-restricted bacterial pathogen Bartonella. PLoS Genet. 7(2):e1001296. [PudMed:21347280] experimental in_silico
experimental This literature contains experimental investigation
in_silico This literature contains bioinformatics investigation