SecReT4

T4SS
References

T4SS ID	219
Strain	Rhizobium etli CFN 42
Replicon	plasmid symbiotic plasmid p42d [Browse all T4SS(s) in this replicon]
Accession	NC_004041
Location	161901..171502; 180067..181986
Name	VirB
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	1	1	1	1	1	1	1	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_004041
Region 1: 161901..171502

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	RHE_PD00139	159233..160111 [+], 879	89255348	conjugal transfer antirestriction protein
2	RHE_PD00140	160299..160619 [+], 321	21492822	hypothetical protein
3	RHE_PD00141	160891..161340 [-], 450	21492821	hypothetical protein
4	RHE_PD00142	161361..161897 [+], 537	89255349	hypothetical protein
5	RHE_PD00143	161901..162569 [+], 669	21492819	transport secretion system IV, VirB1 protein	VirB1
6	RHE_PD00144	162566..162865 [+], 300	21492818	transport secretion system IV, VirB2 protein	VirB2
7	RHE_PD00145	162871..163209 [+], 339	21492817	transport secretion system IV, VirB3 protein	VirB3
8	RHE_PD00146	163181..165568 [+], 2388	21492816	transport secretion system IV, VirB4 protein	VirB4
9	RHE_PD00147	165565..166266 [+], 702	21492815	transport secretion system IV, VirB5 protein	VirB5
10	RHE_PD00148	166499..167431 [+], 933	21492814	transport secretion system IV, VirB6 protein	VirB6
11	RHE_PD00149	167473..167754 [+], 282	21492813	transport secretion system IV, VirB7 protein	VirB7
12	RHE_PD00150	167756..168427 [+], 672	89255350	transport secretion system IV, VirB8 protein	VirB8
13	RHE_PD00151	168424..169281 [+], 858	21492811	transport secretion system IV, VirB9 protein	VirB9
14	RHE_PD00152	169290..170465 [+], 1176	21492810	transport secretion system IV, VirB10 protein	VirB10
15	RHE_PD00153	170474..171502 [+], 1029	21492809	transport secretion system IV, VirB11 protein	VirB11
16	RHE_PD00154	171539..172084 [-], 546	89255351	hypothetical protein
17	RHE_PD00155	172105..172731 [-], 627	21492807	excisonase
18	RHE_PD00156	173058..174248 [-], 1191	89255352	hypothetical protein
19	RHE_PD00158	176165..176431 [+], 267	89255353	hypothetical protein

Region 2: 180067..181986

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	RHE_PD00158	176165..176431 [+], 267	89255353	hypothetical protein
2	RHE_PD00159	176485..176832 [-], 348	89255354	hypothetical protein
3	RHE_PD00160	176816..177334 [+], 519	21492803	hypothetical protein
4	RHE_PD00161	177292..177756 [+], 465	21492802	hypothetical protein
5	RHE_PD00162	178350..178655 [-], 306	21492801	hypothetical protein
6	RHE_PD00163	178723..179154 [-], 432	21492800	hypothetical protein
7	RHE_PD00164	179158..179478 [+], 321	21492799	hypothetical protein
8	RHE_PD00165	179475..179876 [+], 402	21492798	hypothetical protein
9	RHE_PD00166	179789..180058 [+], 270	21492797	hypothetical protein
10	RHE_PD00167	180067..181986 [-], 1920	21492796	conjugal transfer coupling protein TraG	VirD4
11	RHE_PD00168	181977..182216 [-], 240	89255355	conjugal transfer protein D
12	RHE_PD00169	182206..182493 [-], 288	21492794	conjugal transfer protein C

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Gonzalez V; Santamaria RI; Bustos P; Hernandez-Gonzalez I; Medrano-Soto A; Moreno-Hagelsieb G; Janga SC; Ramirez MA; Jimenez-Jacinto V; Collado-Vides J; Davila G (2006). The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons. Proc Natl Acad Sci U S A. 103(10):3834-9. [PudMed:16505379]