| Protein ID: 21492816 |
 T4SS name [ID] | VirB [219] |
| Gene symbol | - |
| Locus tag | RHE_PD00146 |
| Strain | Rhizobium etli CFN 42 |
| Replicon | plasmid symbiotic plasmid p42d [GenBank: NC_004041] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 163181..165568 [+] |
| Product | transport secretion system IV, VirB4 protein |
| Component type | VirB4 |
| UniProt ID | Q8KIM8 |
| KEGG ID | ret:RHE_PD00146 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | CagE_TrbE_VirB [PF03135], Evalue: 1.5e-64, Aligned region: 186..387 AAA_10 [PF12846], Evalue: 1.1e-33, Aligned region: 440..718 |
| Protein Sequence: 795 a.a. [Download] |
| >gi|21492816|ref|NP_659891.1| transport secretion system IV, VirB4 protein [Rhizobium etli CFN 42] MTKGISALSNIATLRSRELGPETFIPYVRHVDETTIALESRALMTMIALDGVSFETSDVRDLNGLHRSLN TLYRNIADERLALWTHVVRRRDNAYPEGRFANPFSDGLNARYRERMVNENLFRNDLYLTLVWHPGRDPAE KAAKLLSRLSKARRSDTELDGQALKHLRDHVADVAAGLQRFGPRQLTLHEHDGILFSEPSEVLHQIVGGR REPIPLTEGRISSAIYSDRVIFGRETIEIRHEADSRYAGMFGFKEYPATTRSGMLDAILTAPFELILTQS FAFTSKADARTIMGRKQNQMVSAGDKAASQIEELGEAMDDLESNRFVLGEHHLTLAVFAPSVKELTDHMA KARAYLTSGGAVVAREDLGLEAAWWAQLPGNFRYRARSGAITSRNFAALAPYHSYPAGKKDGNEWGPAVA MLKTASGSPFYFNFHHGDLGNSFVCGPSGTGKTVLLNFMLSQLEKHGPHMVFFDKDRGADLFVRAAGGTY LPLKNGVATGCAPLKALEFTAENKVFLTGWIAKLVRSGPGELSITELRDIALAVDGVADLPVERRSIGAL RTFLNNTDPEGIAARLRRWEKGGPLGWVFDNEADDIGIGARFIGYDMTDFLDNEEIRTPLMAYLFYRIEQ LIDGRRIIIVIDEFWKALQDEGFRDLAQNKLKTIRKQNGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFL PNPRGDRADYVDGFKLTEREFELVSRELSVESRRFIVKQGHNSVVAELNLNGFDDELAILSGRTANVELA DAIRLEIGEGREDWLAVFHQRRKTA |
| Nucleotide Sequence: 2388 bp [Download] |
| >gi|89255298|ref|NC_004041.2|:163181-165568 Rhizobium etli CFN 42 symbiotic plasmid p42d, complete sequence ATGACGAAAGGGATCTCAGCTTTGTCTAACATTGCGACGCTCCGGTCGCGCGAGCTAGGGCCGGAGACCT TCATTCCCTATGTCAGGCATGTCGACGAGACGACGATTGCGCTCGAATCCCGAGCGTTGATGACAATGAT CGCTCTCGACGGCGTTTCCTTCGAGACATCAGACGTCAGGGATCTCAACGGCCTGCACCGCAGCCTGAAC ACGCTCTATCGCAATATCGCCGACGAGCGACTGGCGCTCTGGACGCATGTGGTGCGCCGCCGCGACAATG CCTATCCCGAGGGACGCTTCGCCAATCCCTTTTCCGACGGTCTGAACGCGCGATATCGGGAGCGGATGGT GAATGAAAACCTGTTTCGCAACGATCTCTACCTCACCCTTGTCTGGCATCCCGGCCGGGATCCTGCCGAA AAGGCGGCCAAGCTTCTCTCTCGACTCAGCAAGGCGCGCCGATCCGATACCGAACTTGACGGGCAGGCTC TGAAGCATCTGCGTGACCACGTGGCGGATGTCGCCGCCGGCCTGCAGCGCTTTGGCCCGCGGCAGCTTAC CCTCCACGAACATGACGGCATCCTGTTCTCCGAGCCGAGCGAAGTTCTCCACCAGATCGTCGGTGGACGG CGGGAGCCGATCCCATTGACGGAGGGACGAATTTCCTCGGCGATCTATTCCGATAGGGTCATTTTCGGGC GCGAGACCATTGAAATCCGTCACGAGGCCGACAGCCGCTATGCCGGCATGTTCGGCTTCAAGGAATATCC GGCGACGACGCGCAGCGGCATGCTCGACGCTATCCTGACCGCACCTTTCGAGCTCATCCTGACGCAGTCC TTCGCCTTCACCTCAAAGGCCGATGCCCGCACGATCATGGGTCGCAAGCAGAACCAGATGGTCAGTGCCG GCGACAAGGCAGCCTCGCAGATCGAAGAACTCGGTGAGGCGATGGACGATCTCGAATCCAATCGCTTCGT TCTTGGGGAACATCATCTTACGCTTGCCGTCTTCGCTCCCTCGGTCAAGGAACTGACCGATCACATGGCG AAGGCGCGCGCCTATCTCACCAGCGGCGGCGCGGTCGTCGCCCGCGAGGATCTTGGGCTCGAGGCTGCCT GGTGGGCACAACTGCCGGGCAATTTCCGCTATCGCGCGCGCTCGGGAGCGATCACCTCCCGCAACTTCGC AGCCCTTGCTCCCTATCATTCCTATCCGGCGGGCAAGAAGGACGGCAACGAGTGGGGACCGGCGGTCGCC ATGCTCAAGACCGCGTCCGGCTCGCCCTTCTATTTCAACTTTCATCACGGCGATCTCGGCAACAGTTTCG TCTGCGGCCCGTCGGGCACGGGCAAGACGGTGCTGTTGAACTTCATGCTGTCCCAGCTCGAAAAGCATGG TCCGCATATGGTCTTCTTCGACAAGGACCGTGGCGCCGATCTCTTCGTGCGAGCGGCTGGCGGCACCTAT CTGCCGCTGAAGAATGGTGTCGCCACCGGCTGCGCGCCGTTGAAAGCATTGGAATTCACTGCGGAAAACA AAGTATTCCTCACCGGTTGGATCGCCAAGCTGGTCCGATCCGGACCTGGCGAATTATCGATTACCGAGTT GCGCGACATCGCCTTGGCGGTCGACGGGGTGGCGGACCTGCCGGTGGAGCGTCGCTCCATCGGCGCCCTG CGCACCTTCCTCAACAACACCGATCCCGAGGGCATTGCCGCACGTCTCCGACGATGGGAAAAGGGCGGCC CGCTCGGCTGGGTATTCGACAACGAGGCTGACGATATCGGCATCGGCGCCAGGTTCATCGGCTACGACAT GACCGATTTCCTCGACAATGAGGAGATCCGCACGCCGTTGATGGCCTACCTGTTCTATCGGATCGAGCAG CTGATCGACGGGCGTCGCATCATCATTGTCATCGACGAGTTCTGGAAGGCGCTGCAGGACGAAGGCTTTC GTGATCTCGCCCAGAACAAACTCAAGACGATCCGCAAGCAGAACGGTCTCATGCTGTTTGCGACCCAGAG CCCGCGCGATGCCATCGTCTCGCCGATCGCCCACACGATCATCGAGCAGTGCCCGACACAGATCTTTCTT CCGAACCCGCGCGGCGACCGCGCCGACTATGTCGACGGCTTCAAGCTGACGGAGCGCGAATTCGAGCTCG TCTCGCGCGAACTCTCCGTCGAGAGCCGCCGGTTCATCGTCAAGCAGGGGCACAACAGCGTTGTCGCCGA GCTGAACCTCAACGGCTTCGACGACGAACTTGCCATCCTCTCCGGCCGGACCGCCAATGTCGAGCTTGCC GATGCTATCCGTTTGGAGATCGGCGAGGGACGGGAGGACTGGCTTGCCGTGTTTCATCAGAGGAGGAAGA CAGCATGA |