SecReT4

T4SS
References

T4SS ID	188
Strain	Xylella fastidiosa 9a5c
Replicon	plasmid pXF51 [Browse all T4SS(s) in this replicon]
Accession	NC_002490
Location	435..15164
Name	VirB
Function	conjugation
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	1	1	1	1	1	1	1	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_002490

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	XFa0001	41..301 [+], 261	10956712	transcriptional regulator
2	XFa0002	435..1010 [+], 576	10956713	conjugal transfer protein	VirB1
3	XFa0003	1012..2994 [+], 1983	10956714	topoisomerase I
4	XFa0004	3065..3328 [+], 264	10956715	hypothetical protein
5	XFa0005	3437..3709 [+], 273	10956716	conjugal transfer protein	VirB2
6	XFa0006	3712..4080 [+], 369	10956717	conjugal transfer protein	VirB3
7	XFa0007	4094..6541 [+], 2448	10956718	conjugal transfer protein	VirB4
8	XFa0008	6538..7218 [+], 681	10956719	conjugal transfer protein	VirB5
9	XFa0009	7339..7500 [+], 162	10956720	hypothetical protein
10	XFa0010	7542..7790 [+], 249	10956721	hypothetical protein
11	XFa0011	7794..8840 [+], 1047	10956722	conjugal transfer protein	VirB6
12	XFa0065	8978..9169 [+], 192	15426424	conjugal transfer protein	VirB7
13	XFa0012	9150..9971 [+], 822	10956723	conjugal transfer protein	VirB8
14	XFa0013	9982..10818 [+], 837	10956724	conjugal transfer protein	VirB9
15	XFa0014	10818..12161 [+], 1344	10956725	conjugal transfer protein	VirB10
16	XFa0015	12146..13189 [+], 1044	10956726	conjugal transfer protein	VirB11
17	XFa0016	13194..15164 [+], 1971	10956727	conjugal transfer protein	VirD4
18	XFa0017	15175..17466 [+], 2292	10956728	hypothetical protein
19	XFa0018	17657..17983 [+], 327	10956729	hypothetical protein
20	XFa0019	18343..18909 [-], 567	10956730	recombinase
21	XFa0020	18959..19261 [-], 303	10956731	hypothetical protein
22	XFa0021	19254..19391 [-], 138	10956732	hypothetical protein
23	XFa0022	19412..19831 [-], 420	10956733	hypothetical protein
24	XFa0023	19831..20070 [-], 240	10956734	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Meidanis J; Braga MD; Verjovski-Almeida S (2002). Whole-genome analysis of transporters in the plant pathogen Xylella fastidiosa. Microbiol Mol Biol Rev. 66(2):272-99. [PudMed:12040127]