Detailed information NTG0999938

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: ABFU06_RS12190
• Genome accession: NZ_CP155938
• Coordinates: 2909425..2910456 (-)
• Length: 343 a.a.
• NCBI ID: WP_011036899.1
• Uniprot ID: Q60101
• Organism: Xanthomonas campestris pv. raphani strain Xcc-R1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2904425..2915456

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFU06_RS12175 (ABFU06_12140)	csrA	2905717..2905929 (-)	213	WP_014507494.1	carbon storage regulator CsrA	-
ABFU06_RS12180 (ABFU06_12145)	alaS	2906071..2908719 (-)	2649	WP_076055532.1	alanine--tRNA ligase	-
ABFU06_RS12185 (ABFU06_12150)	recX	2908821..2909309 (-)	489	WP_014507491.1	recombination regulator RecX	-
ABFU06_RS12190 (ABFU06_12155)	recA	2909425..2910456 (-)	1032	WP_011036899.1	recombinase RecA	Machinery gene
ABFU06_RS12195 (ABFU06_12160)	lexA	2910629..2911270 (-)	642	WP_011269877.1	transcriptional repressor LexA	-
ABFU06_RS12200 (ABFU06_12165)	ubiB	2911337..2913013 (-)	1677	WP_011036897.1	2-polyprenylphenol 6-hydroxylase	-

Sequence

Protein

• Length: 343 a.a.
• Molecular weight: 37017.64 Da
• Isoelectric Point: 5.0702

>NTDB_id=999938 ABFU06_RS12190 WP_011036899.1 2909425..2910456(-) (recA) [Xanthomonas campestris pv. raphani strain Xcc-R1]
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKLGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSSSVDIVVIDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVITEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARGYLRDNPQVAIKL
EAELREKFQPAEAPREAGETESE

Nucleotide

• Length: 1032 bp

>NTDB_id=999938 ABFU06_RS12190 WP_011036899.1 2909425..2910456(-) (recA) [Xanthomonas campestris pv. raphani strain Xcc-R1]
ATGGATGAGAACAAGAAGCGCGCCCTTTCCGCCGCCCTGAGCCAGATCGAAAAGCAATTCGGCAAAGGCTCGGTGATGCG
CATGGGCGACCGGGTCATCGAGGCCGTCGAGGTCATCCCGACCGGTTCGCTGATGCTGGACATCGCACTGGGGATCGGCG
GCCTGCCGAAGGGCCGCGTGGTCGAGATCTACGGGCCGGAATCCTCGGGCAAGACCACCCTCACCCTGCAGGCCATTGCC
GAATGCCAGAAGCTGGGCGGCACCGCGGCCTTCATCGACGCCGAGCATGCGCTGGACCCGATCTATGCCGCCAAGCTGGG
CGTCAATGTCGATGACCTGCTGCTGTCGCAGCCGGATACCGGTGAGCAGGCGCTGGAAATCGCCGACATGCTGGTGCGTT
CGAGCTCGGTGGACATCGTGGTGATCGACTCGGTTGCCGCGCTGACCCCGAAGGCCGAAATCGAAGGCGAGATGGGCGAT
CAGCTGCCCGGCCTGCAGGCCCGTTTGATGAGCCAGGCGCTGCGCAAGCTCACCGGCAACATCAAGCGCTCCAACACGTT
GGTGGTCTTCATCAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCGGGCCAGAGCCCGGAAGTGACCACCGGCGGCA
ATGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATCGGTGCGATCAAGAAGGGTGACGAGATCATCGGC
AACCAGACCAAGATCAAGGTGGTCAAGAACAAGCTGGCACCTCCGTTCAAGCAGGTCATTACCGAGATTCTGTACGGCGA
AGGCATCAGCCGCGAGGGTGAGCTGATCGATATGGGCGTGGAAGCCAAGCTGGTCGACAAGGCAGGTGCCTGGTACAGCT
ACGGCGACGAGCGCATCGGCCAGGGCAAGGACAACGCCCGTGGGTATCTGCGCGACAACCCGCAGGTGGCGATCAAGCTC
GAAGCCGAGCTGCGCGAGAAGTTCCAGCCCGCCGAGGCGCCGCGTGAAGCCGGCGAGACCGAGAGCGAGTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

3D structure

• AlphaFold DB: Q60101

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	69.971	100	0.7
recA	Ralstonia pseudosolanacearum GMI1000	76.038	91.254	0.694
recA	Pseudomonas stutzeri DSM 10701	70.326	98.251	0.691
recA	Acinetobacter baumannii D1279779	71.646	95.627	0.685
recA	Vibrio cholerae strain A1552	68.129	99.708	0.679
recA	Vibrio cholerae O1 biovar El Tor strain E7946	68.129	99.708	0.679
recA	Neisseria gonorrhoeae MS11	68.098	95.044	0.647
recA	Neisseria gonorrhoeae MS11	68.098	95.044	0.647
recA	Neisseria gonorrhoeae strain FA1090	68.098	95.044	0.647
recA	Glaesserella parasuis strain SC1401	68.111	94.169	0.641
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.874	97.376	0.612
recA	Latilactobacillus sakei subsp. sakei 23K	61.677	97.376	0.601
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.669	92.42	0.598
recA	Helicobacter pylori strain NCTC11637	61.145	96.793	0.592
recA	Bacillus subtilis subsp. subtilis str. 168	62.154	94.752	0.589
recA	Helicobacter pylori 26695	60.843	96.793	0.589
recA	Streptococcus mitis SK321	60.671	95.627	0.58
recA	Streptococcus pneumoniae Rx1	60.366	95.627	0.577
recA	Streptococcus mitis NCTC 12261	60.366	95.627	0.577
recA	Streptococcus pneumoniae D39	60.366	95.627	0.577
recA	Streptococcus pneumoniae R6	60.366	95.627	0.577
recA	Streptococcus pneumoniae TIGR4	60.366	95.627	0.577
recA	Streptococcus pyogenes NZ131	60	96.21	0.577
recA	Streptococcus mutans UA159	59.697	96.21	0.574
recA	Lactococcus lactis subsp. cremoris KW2	59.385	94.752	0.563
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.879	96.21	0.557