Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   EL079_RS04945 Genome accession   NZ_LR134283
Coordinates   1020739..1021425 (-) Length   228 a.a.
NCBI ID   WP_003031491.1    Uniprot ID   -
Organism   Streptococcus anginosus strain NCTC10713     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1015739..1026425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL079_RS04925 (NCTC10713_01030) - 1015953..1017929 (-) 1977 WP_003030754.1 FtsX-like permease family protein -
  EL079_RS04930 (NCTC10713_01031) - 1017910..1018689 (-) 780 WP_022524390.1 ABC transporter ATP-binding protein -
  EL079_RS09935 (NCTC10713_01032) - 1018704..1018832 (-) 129 WP_003031478.1 hypothetical protein -
  EL079_RS04935 (NCTC10713_01033) - 1018894..1019652 (-) 759 WP_003031479.1 TraX family protein -
  EL079_RS04940 (NCTC10713_01034) - 1019775..1020755 (-) 981 WP_003031481.1 sensor histidine kinase -
  EL079_RS04945 (NCTC10713_01035) braR 1020739..1021425 (-) 687 WP_003031491.1 response regulator transcription factor Regulator
  EL079_RS04950 (NCTC10713_01036) - 1021517..1022698 (+) 1182 WP_003031486.1 DUF2974 domain-containing protein -
  EL079_RS04955 (NCTC10713_01037) metG 1023218..1025215 (-) 1998 WP_003031477.1 methionine--tRNA ligase -
  EL079_RS04960 (NCTC10713_01038) - 1025461..1025721 (+) 261 WP_003031489.1 SemiSWEET family transporter -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 26210.43 Da        Isoelectric Point: 4.8810

>NTDB_id=999911 EL079_RS04945 WP_003031491.1 1020739..1021425(-) (braR) [Streptococcus anginosus strain NCTC10713]
MHKILLVEDDAVIRQQVKKMLEQWGFEVVAVEDFMQVLTIFVKEEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGGDDFVTKPFDNNVLLAKVQGLLRRSYEFGTDQSLLEYHGVILNLKSMDMVYEGEVITLTKNEFQIL
RVLFEHSGSIVARDDLMKELWNSDFFIDDNTLSVNVARLRKKLEEVGLKNFIETKKGIGYGLTNGSSE

Nucleotide


Download         Length: 687 bp        

>NTDB_id=999911 EL079_RS04945 WP_003031491.1 1020739..1021425(-) (braR) [Streptococcus anginosus strain NCTC10713]
ATGCACAAGATATTATTAGTAGAAGACGATGCTGTCATTCGCCAACAAGTCAAAAAAATGCTGGAGCAATGGGGATTTGA
AGTGGTTGCAGTAGAGGATTTCATGCAGGTTTTGACGATTTTTGTCAAGGAAGAACCACATCTAGTGCTGATGGATATTG
GTCTCCCACTTTTTAATGGTTATCATTGGTGCCAAGAAATTCGTAAGATTTCTAAAGTGCCCATTATGTTTTTGTCGTCA
AGAGACCAAGCGATGGATATTGTCATGGCAATCAATATGGGTGGTGATGACTTTGTCACAAAACCGTTTGATAACAATGT
TCTCCTCGCTAAAGTGCAAGGACTGTTGCGGCGGTCTTATGAGTTTGGAACGGATCAAAGCTTACTGGAATATCATGGAG
TTATTCTCAATCTCAAGTCCATGGATATGGTTTATGAAGGTGAAGTCATTACCTTGACCAAAAATGAATTTCAGATTTTG
CGCGTGCTGTTTGAGCATTCTGGCAGTATTGTCGCGCGTGATGACCTGATGAAAGAGCTCTGGAATAGTGATTTTTTCAT
TGATGACAATACCTTGTCGGTCAATGTGGCACGGTTGCGGAAAAAATTAGAAGAAGTCGGTCTCAAGAATTTCATTGAAA
CAAAGAAAGGTATAGGCTACGGATTAACCAATGGATCATCAGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

49.541

95.614

0.474

Multiple sequence alignment