Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABFU18_RS06090 Genome accession   NZ_CP155930
Coordinates   1447632..1448033 (+) Length   133 a.a.
NCBI ID   WP_011038048.1    Uniprot ID   Q8P6P2
Organism   Xanthomonas campestris pv. campestris strain CFBP 4954     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1442632..1453033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFU18_RS06060 (ABFU18_06060) - 1443070..1443071 (-) 2 WP_087942078.1 IS5 family transposase -
  ABFU18_RS06070 (ABFU18_06070) tsaB 1443725..1444444 (+) 720 WP_011038052.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  ABFU18_RS06075 (ABFU18_06075) - 1444444..1445367 (+) 924 WP_011038051.1 ADP-ribosylglycohydrolase family protein -
  ABFU18_RS06080 (ABFU18_06080) - 1445572..1446447 (-) 876 WP_011038050.1 energy transducer TonB -
  ABFU18_RS06085 (ABFU18_06085) gshB 1446444..1447394 (-) 951 WP_011038049.1 glutathione synthase -
  ABFU18_RS06090 (ABFU18_06090) pilG 1447632..1448033 (+) 402 WP_011038048.1 twitching motility response regulator PilG Regulator
  ABFU18_RS06095 (ABFU18_06095) - 1448051..1448413 (+) 363 WP_011038047.1 PleD family two-component system response regulator -
  ABFU18_RS06100 (ABFU18_06100) - 1448413..1448943 (+) 531 WP_014508568.1 chemotaxis protein CheW -
  ABFU18_RS06105 (ABFU18_06105) - 1448983..1451019 (+) 2037 WP_011038045.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14676.05 Da        Isoelectric Point: 6.3482

>NTDB_id=999809 ABFU18_RS06090 WP_011038048.1 1447632..1448033(+) (pilG) [Xanthomonas campestris pv. campestris strain CFBP 4954]
MTENMAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=999809 ABFU18_RS06090 WP_011038048.1 1447632..1448033(+) (pilG) [Xanthomonas campestris pv. campestris strain CFBP 4954]
ATGACTGAAAACATGGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTTATCGATGATTCGAAGACCATTCGCCG
CACTGCCGAAACGCTGCTCAAGCGCGAAGGCTGTGAAGTGGTTACAGCGACGGACGGATTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTGGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCTTCCAAGGATGGCCTGTTTGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACCCGTGAAGAACTACTGAGCGCGATCCGTACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8P6P2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment