Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   EL099_RS09815 Genome accession   NZ_LR134271
Coordinates   1935163..1935903 (-) Length   246 a.a.
NCBI ID   WP_000216880.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NCTC7988     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1930163..1940903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL099_RS09790 (NCTC7988_01852) hemH 1931040..1931963 (-) 924 WP_000162878.1 ferrochelatase -
  EL099_RS09795 (NCTC7988_01853) hemE 1932021..1933058 (-) 1038 WP_000233540.1 uroporphyrinogen decarboxylase -
  EL099_RS09800 - 1933048..1933134 (-) 87 WP_031875110.1 hypothetical protein -
  EL099_RS09805 (NCTC7988_01854) traP 1933320..1933823 (+) 504 WP_000737980.1 signal transduction protein TRAP -
  EL099_RS09810 (NCTC7988_01855) ecsB 1933947..1935170 (-) 1224 WP_001245757.1 ABC transporter permease EcsB -
  EL099_RS09815 (NCTC7988_01856) pptA 1935163..1935903 (-) 741 WP_000216880.1 ABC transporter ATP-binding protein EcsA Regulator
  EL099_RS09820 (NCTC7988_01857) - 1936037..1936459 (+) 423 WP_000004981.1 HIT family protein -
  EL099_RS09825 (NCTC7988_01858) - 1936601..1936966 (+) 366 WP_000648118.1 YtxH domain-containing protein -
  EL099_RS09835 (NCTC7988_01859) - 1937698..1938255 (+) 558 WP_000477959.1 DUF3267 domain-containing protein -
  EL099_RS09840 (NCTC7988_01860) - 1938460..1939422 (+) 963 WP_000782119.1 foldase protein PrsA -
  EL099_RS09845 (NCTC7988_01861) yhaM 1939543..1940484 (-) 942 WP_001244175.1 3'-5' exoribonuclease YhaM -

Sequence

Protein


Download         Length: 246 a.a.        Molecular weight: 27687.96 Da        Isoelectric Point: 4.6672

>NTDB_id=999512 EL099_RS09815 WP_000216880.1 1935163..1935903(-) (pptA) [Staphylococcus aureus strain NCTC7988]
MTVKVEQLTGGYGKRPVIKDINFELNKGEIVGLIGLNGAGKSTTIKHMLGLLTPMEGSLSNSDININDDIEAYRRKLSYI
PESPVIYEELTLEEHIEMTAMAYDIDRDEAMNRAMPLLKTFRLENELKVFPSHFSKGMKQKVMIICAFIVNPELYIIDEP
FLGLDPLGIQSMLDLMVEKKNEGRTVLMSTHILATAERYCDRFIILDEGEVVAFGDLEALRQQTGLHNQTLDDIYIHVTQ
GGDVHA

Nucleotide


Download         Length: 741 bp        

>NTDB_id=999512 EL099_RS09815 WP_000216880.1 1935163..1935903(-) (pptA) [Staphylococcus aureus strain NCTC7988]
ATGACAGTTAAAGTAGAACAGCTTACAGGTGGATATGGAAAACGCCCTGTAATTAAAGATATAAATTTTGAATTAAACAA
AGGCGAAATCGTTGGACTTATTGGCCTTAATGGCGCTGGTAAGAGTACAACGATTAAACATATGCTAGGATTGCTTACAC
CTATGGAAGGATCTCTATCAAATTCAGATATCAACATTAATGATGACATAGAGGCTTATAGAAGAAAGTTATCTTATATT
CCGGAATCACCGGTTATTTATGAAGAACTCACATTAGAGGAACACATTGAGATGACAGCAATGGCATATGATATTGATCG
TGATGAAGCGATGAATCGAGCAATGCCATTATTAAAGACATTCCGTTTAGAAAATGAATTGAAAGTTTTTCCGAGTCATT
TTTCTAAGGGGATGAAACAAAAAGTCATGATTATTTGTGCGTTTATCGTTAATCCCGAATTGTATATTATAGACGAACCA
TTCCTTGGTCTAGATCCATTAGGAATTCAATCCATGTTAGATTTAATGGTTGAAAAGAAAAACGAAGGTAGAACCGTTCT
AATGAGTACACATATTTTAGCAACAGCTGAACGTTATTGTGATCGTTTTATCATACTAGACGAAGGTGAAGTCGTTGCAT
TTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACGTTAGACGATATATATATTCATGTGACGCAA
GGTGGAGATGTACATGCGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-161)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

97.154

0.553
  pptA Streptococcus thermophilus LMD-9

55.649

97.154

0.541