Detailed information NTG0999373

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ABEG41_RS06295
• Genome accession: NZ_CP155795
• Coordinates: 1198429..1199382 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus subtilis strain D137
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1193429..1204382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEG41_RS06270 (ABEG41_06270)	argF	1195261..1196220 (+)	960	WP_003232980.1	ornithine carbamoyltransferase	-
ABEG41_RS06275 (ABEG41_06275)	yjzC	1196306..1196485 (+)	180	WP_003245356.1	YjzC family protein	-
ABEG41_RS06280 (ABEG41_06280)	yjzD	1196531..1196716 (-)	186	WP_029317607.1	DUF2929 domain-containing protein	-
ABEG41_RS06285 (ABEG41_06285)	-	1196966..1197700 (+)	735	WP_003245223.1	hypothetical protein	-
ABEG41_RS06290 (ABEG41_06290)	-	1197782..1198339 (+)	558	WP_014479435.1	hypothetical protein	-
ABEG41_RS06295 (ABEG41_06295)	med	1198429..1199382 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
ABEG41_RS06300 (ABEG41_06300)	comZ	1199397..1199588 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ABEG41_RS06305 (ABEG41_06305)	yjzB	1199618..1199857 (-)	240	WP_003232972.1	spore coat protein YjzB	-
ABEG41_RS06310 (ABEG41_06310)	fabH	1200022..1200960 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
ABEG41_RS06315 (ABEG41_06315)	fabF	1200983..1202224 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
ABEG41_RS06320 (ABEG41_06320)	yjaZ	1202300..1203085 (+)	786	WP_032721346.1	DUF2268 domain-containing protein	-
ABEG41_RS06325 (ABEG41_06325)	appD	1203277..1204263 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=999373 ABEG41_RS06295 WP_014476425.1 1198429..1199382(+) (med) [Bacillus subtilis strain D137]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=999373 ABEG41_RS06295 WP_014476425.1 1198429..1199382(+) (med) [Bacillus subtilis strain D137]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGTACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCCTCCTTTACGTGGCAG
CCTGAGGTTGATGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAATAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997