Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | ABEG41_RS01970 | Genome accession | NZ_CP155795 |
| Coordinates | 371258..371707 (-) | Length | 149 a.a. |
| NCBI ID | WP_003234608.1 | Uniprot ID | A0A8E0S750 |
| Organism | Bacillus subtilis strain D137 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 366258..376707
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABEG41_RS01935 (ABEG41_01935) | yckA | 366531..367211 (-) | 681 | WP_003234624.1 | amino acid ABC transporter permease | - |
| ABEG41_RS01940 (ABEG41_01940) | yckB | 367221..368084 (-) | 864 | WP_015715225.1 | transporter substrate-binding domain-containing protein | - |
| ABEG41_RS01945 (ABEG41_01945) | - | 368246..368441 (+) | 196 | Protein_339 | hypothetical protein | - |
| ABEG41_RS01950 (ABEG41_01950) | - | 368481..368795 (+) | 315 | Protein_340 | RDD family protein | - |
| ABEG41_RS01955 (ABEG41_01955) | yckD | 368877..369209 (+) | 333 | WP_015252849.1 | YckD family protein | - |
| ABEG41_RS01960 (ABEG41_01960) | bglC | 369363..370796 (+) | 1434 | WP_003234614.1 | 6-phospho-beta-glucosidase | - |
| ABEG41_RS01965 (ABEG41_01965) | nin/comJ | 370833..371231 (-) | 399 | WP_015715226.1 | DNA-entry nuclease inhibitor | Regulator |
| ABEG41_RS01970 (ABEG41_01970) | nucA/comI | 371258..371707 (-) | 450 | WP_003234608.1 | DNA-entry nuclease | Machinery gene |
| ABEG41_RS01975 (ABEG41_01975) | tlpC | 371875..373596 (-) | 1722 | WP_029727077.1 | methyl-accepting chemotaxis protein TlpC | - |
| ABEG41_RS01980 (ABEG41_01980) | hxlB | 373707..374264 (-) | 558 | WP_003234605.1 | 6-phospho-3-hexuloisomerase | - |
| ABEG41_RS01985 (ABEG41_01985) | hxlA | 374270..374902 (-) | 633 | WP_003234604.1 | 3-hexulose-6-phosphate synthase | - |
| ABEG41_RS01990 (ABEG41_01990) | hxlR | 375135..375497 (+) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16470.42 Da Isoelectric Point: 4.5282
>NTDB_id=999359 ABEG41_RS01970 WP_003234608.1 371258..371707(-) (nucA/comI) [Bacillus subtilis strain D137]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSTDQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSTDQKTSQTKEYDETIAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=999359 ABEG41_RS01970 WP_003234608.1 371258..371707(-) (nucA/comI) [Bacillus subtilis strain D137]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTTTCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTTTCAACTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATCGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGACACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAGGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
AGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
97.987 |
100 |
0.98 |