Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | ABEG10_RS16250 | Genome accession | NZ_CP155787 |
| Coordinates | 3386488..3387648 (+) | Length | 386 a.a. |
| NCBI ID | WP_060210965.1 | Uniprot ID | A0A1V2VY75 |
| Organism | Burkholderia cenocepacia strain TY921 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3381488..3392648
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABEG10_RS16220 (ABEG10_16220) | - | 3382135..3382740 (+) | 606 | WP_006483734.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| ABEG10_RS16225 (ABEG10_16225) | pth | 3382862..3383461 (+) | 600 | WP_034201350.1 | aminoacyl-tRNA hydrolase | - |
| ABEG10_RS16230 (ABEG10_16230) | hisC | 3383578..3384645 (+) | 1068 | WP_034201349.1 | histidinol-phosphate transaminase | - |
| ABEG10_RS16235 (ABEG10_16235) | - | 3384724..3384990 (-) | 267 | WP_043206196.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| ABEG10_RS16240 (ABEG10_16240) | coaD | 3385050..3385547 (-) | 498 | WP_006477773.1 | pantetheine-phosphate adenylyltransferase | - |
| ABEG10_RS16245 (ABEG10_16245) | rsmD | 3385659..3386273 (-) | 615 | WP_006483748.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| ABEG10_RS16250 (ABEG10_16250) | pilA | 3386488..3387648 (+) | 1161 | WP_060210965.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| ABEG10_RS16255 (ABEG10_16255) | maiA | 3387734..3388378 (-) | 645 | WP_006499022.1 | maleylacetoacetate isomerase | - |
| ABEG10_RS16260 (ABEG10_16260) | ybiB | 3388558..3389532 (+) | 975 | WP_006483732.1 | DNA-binding protein YbiB | - |
| ABEG10_RS16265 (ABEG10_16265) | leuA | 3389901..3391547 (+) | 1647 | WP_060210966.1 | 2-isopropylmalate synthase | - |
| ABEG10_RS16270 (ABEG10_16270) | - | 3391692..3392075 (-) | 384 | WP_006483747.1 | nuclear transport factor 2 family protein | - |
Sequence
Protein
Download Length: 386 a.a. Molecular weight: 40967.93 Da Isoelectric Point: 4.7979
>NTDB_id=999322 ABEG10_RS16250 WP_060210965.1 3386488..3387648(+) (pilA) [Burkholderia cenocepacia strain TY921]
MFSFFKRFKKTQEPDPAESQSADAQQADEASDADAPVLDAPPAASVPPAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVP
PPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRAGRLTDPQQV
KAALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHEGAPHEVLLVIDANTGQNAL
TQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG
MFSFFKRFKKTQEPDPAESQSADAQQADEASDADAPVLDAPPAASVPPAPAQPAAPAVVMTVTPTNDGRDEVVETVEIVP
PPLQDASAKKSWLARLKTGLAKTGSSITGVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRAGRLTDPQQV
KAALHDLLVELLTPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERN
NVTVVQQESGDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHEGAPHEVLLVIDANTGQNAL
TQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFSAVEFADALLG
Nucleotide
Download Length: 1161 bp
>NTDB_id=999322 ABEG10_RS16250 WP_060210965.1 3386488..3387648(+) (pilA) [Burkholderia cenocepacia strain TY921]
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAAGCGTCCGACGCCGACGCGCCCGTGCTCGACGCGCCGCCCGCGGCCAGCGTGCCGCCGGCGCCCGCGCAACCGG
CTGCGCCGGCCGTCGTGATGACCGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTGCCG
CCGCCGCTGCAGGACGCGTCCGCGAAGAAGTCGTGGCTCGCGCGCCTGAAGACGGGGCTCGCGAAGACGGGCTCGAGCAT
CACCGGCGTCTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGG
GCGTCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCGCGGGCCGGCTCACCGATCCGCAGCAGGTG
AAGGCTGCACTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCT
CGTGATGATGATCACCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCACCTGCAGAGCTTCG
ACCAGTCGGTGCTGCTGGCTGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAAC
AACGTGACGGTCGTGCAGCAGGAGAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAA
GATCGACGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTGCATCTGATGGAGGAGCTGAAGAAGGTGAAGC
GCGTGATCGCGAAGGCGCACGAAGGCGCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTC
ACGCAGGTGAAGGCCTTCGACGACGCGCTGGGCCTGACCGGCCTGATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGG
GATTCTCGCCGCGATCGCGCGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGC
CGTTCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA
ATGTTCAGTTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGATCCGGCGGAATCGCAATCGGCCGACGCGCAGCAAGC
GGACGAAGCGTCCGACGCCGACGCGCCCGTGCTCGACGCGCCGCCCGCGGCCAGCGTGCCGCCGGCGCCCGCGCAACCGG
CTGCGCCGGCCGTCGTGATGACCGTCACGCCGACCAACGACGGCCGCGACGAAGTCGTCGAGACGGTCGAGATCGTGCCG
CCGCCGCTGCAGGACGCGTCCGCGAAGAAGTCGTGGCTCGCGCGCCTGAAGACGGGGCTCGCGAAGACGGGCTCGAGCAT
CACCGGCGTCTTCGTCAACACGAAGATCGACGAGGATCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGACGCGG
GCGTCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAAAAGGTGCGCGCGGGCCGGCTCACCGATCCGCAGCAGGTG
AAGGCTGCACTGCACGACCTGCTCGTCGAGCTGCTGACGCCGCTCGAGAAATCGCTGATGCTCGGCCGCGCGCAGCCGCT
CGTGATGATGATCACCGGCGTGAACGGCGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCACCTGCAGAGCTTCG
ACCAGTCGGTGCTGCTGGCTGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAACAGCTGGCGGTCTGGGGCGAGCGCAAC
AACGTGACGGTCGTGCAGCAGGAGAGCGGCGATCCGGCCGCGGTGATCTTCGACGCGGTCAGCGCCGCGCGCGCGCGCAA
GATCGACGTGATGATGGCCGACACGGCCGGCCGCCTGCCGACGCAGCTGCATCTGATGGAGGAGCTGAAGAAGGTGAAGC
GCGTGATCGCGAAGGCGCACGAAGGCGCGCCGCACGAAGTGCTGCTGGTGATCGACGCGAACACCGGCCAGAACGCGCTC
ACGCAGGTGAAGGCCTTCGACGACGCGCTGGGCCTGACCGGCCTGATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGG
GATTCTCGCCGCGATCGCGCGGCAACGGCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGC
CGTTCAGCGCGGTGGAATTCGCGGACGCGCTGCTCGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
53.606 |
100 |
0.578 |