Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ABD409_RS09845 Genome accession   NZ_CP155741
Coordinates   1971684..1972460 (+) Length   258 a.a.
NCBI ID   WP_014407987.1    Uniprot ID   A0A4U9TLU5
Organism   Streptococcus pyogenes strain 400/03     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1966684..1977460
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABD409_RS09825 (ABD409_09800) - 1968306..1969286 (-) 981 WP_023612094.1 IS30 family transposase -
  ABD409_RS09835 (ABD409_09810) rlmH 1969681..1970160 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ABD409_RS09840 (ABD409_09815) htrA 1970372..1971595 (+) 1224 WP_002994926.1 S1C family serine protease Regulator
  ABD409_RS09845 (ABD409_09820) spo0J 1971684..1972460 (+) 777 WP_014407987.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29042.85 Da        Isoelectric Point: 10.3100

>NTDB_id=999284 ABD409_RS09845 WP_014407987.1 1971684..1972460(+) (spo0J) [Streptococcus pyogenes strain 400/03]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKAIEEGKISA
GHARALLTLSDDKQQLYLTHKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=999284 ABD409_RS09845 WP_014407987.1 1971684..1972460(+) (spo0J) [Streptococcus pyogenes strain 400/03]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATCATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAATACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAGCAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTCATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCAA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(9-96)

HTH domain found in ParB protein (HTH_ParB)

(148-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4U9TLU5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585

Multiple sequence alignment