Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | ABDZ21_RS17755 | Genome accession | NZ_CP155721 |
| Coordinates | 3673067..3673540 (-) | Length | 157 a.a. |
| NCBI ID | WP_001214065.1 | Uniprot ID | N9K1Q3 |
| Organism | Acinetobacter baumannii strain 2024CK-00246 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3668067..3678540
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDZ21_RS17740 (ABDZ21_17740) | pilX | 3670696..3671514 (-) | 819 | WP_281717928.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABDZ21_RS17745 (ABDZ21_17745) | pilW | 3671511..3672512 (-) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| ABDZ21_RS17750 (ABDZ21_17750) | pilV | 3672513..3673073 (-) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| ABDZ21_RS17755 (ABDZ21_17755) | fimU | 3673067..3673540 (-) | 474 | WP_001214065.1 | GspH/FimT family pseudopilin | Machinery gene |
| ABDZ21_RS17760 (ABDZ21_17760) | ispH | 3673710..3674660 (-) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ABDZ21_RS17765 (ABDZ21_17765) | gmk | 3674783..3675412 (+) | 630 | WP_000015937.1 | guanylate kinase | - |
| ABDZ21_RS17770 (ABDZ21_17770) | rpoZ | 3675485..3675763 (+) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| ABDZ21_RS17775 (ABDZ21_17775) | - | 3675802..3675931 (+) | 130 | Protein_3471 | hypothetical protein | - |
| ABDZ21_RS17780 (ABDZ21_17780) | - | 3675971..3678076 (+) | 2106 | WP_001117589.1 | HD domain-containing protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16837.43 Da Isoelectric Point: 8.5355
>NTDB_id=998723 ABDZ21_RS17755 WP_001214065.1 3673067..3673540(-) (fimU) [Acinetobacter baumannii strain 2024CK-00246]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=998723 ABDZ21_RS17755 WP_001214065.1 3673067..3673540(-) (fimU) [Acinetobacter baumannii strain 2024CK-00246]
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTGGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
ATGAGGGGAATTATTCCACAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCGCCATCAATGTCAAATTTATTAGAAAGTAAACGTTTGGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACCACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTAGTTTTTAAGGCCGAGGAGACTTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |