Detailed information NTG0998519

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EL088_RS21590
• Genome accession: NZ_LR134220
• Coordinates: 4403190..4404215 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NCTC11121
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4398190..4409215

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL088_RS21570 (NCTC11121_04364)	metJ	4399251..4399568 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
EL088_RS21575 (NCTC11121_04365)	yiiX	4399752..4400360 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
EL088_RS21580 (NCTC11121_04366)	rpmE	4400421..4400633 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EL088_RS21585 (NCTC11121_04367)	priA	4400836..4403034 (+)	2199	WP_073544816.1	primosomal protein N'	Machinery gene
EL088_RS21590 (NCTC11121_04368)	cytR	4403190..4404215 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EL088_RS21595 (NCTC11121_04369)	ftsN	4404307..4405266 (+)	960	WP_000068828.1	cell division protein FtsN	-
EL088_RS21600 (NCTC11121_04370)	hslV	4405359..4405889 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EL088_RS21605 (NCTC11121_04371)	hslU	4405899..4407230 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EL088_RS21610 (NCTC11121_04372)	menA	4407297..4408223 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EL088_RS21615 (NCTC11121_04373)	rraA	4408316..4408801 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
EL088_RS21620 (NCTC11121_04374)	zapB	4408886..4409131 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=998519 EL088_RS21590 WP_000644904.1 4403190..4404215(+) (cytR) [Escherichia coli strain NCTC11121]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=998519 EL088_RS21590 WP_000644904.1 4403190..4404215(+) (cytR) [Escherichia coli strain NCTC11121]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628