Detailed information NTG0099833

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: L282_RS11300
• Genome accession: NZ_CP005930
• Coordinates: 2263094..2264119 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli APEC IMT5155
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2258094..2269119

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L282_RS11270 (L282_2205)	zapB	2258178..2258423 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
L282_RS11275 (L282_2206)	rraA	2258508..2258993 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
L282_RS11280 (L282_2207)	menA	2259086..2260012 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
L282_RS11285 (L282_2208)	hslU	2260079..2261410 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
L282_RS11290 (L282_2209)	hslV	2261420..2261950 (-)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
L282_RS11295 (L282_2210)	ftsN	2262043..2263002 (-)	960	WP_000068834.1	cell division protein FtsN	-
L282_RS11300 (L282_2211)	cytR	2263094..2264119 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
L282_RS11305 (L282_2212)	priA	2264275..2266473 (-)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
L282_RS11310 (L282_2213)	rpmE	2266676..2266888 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
L282_RS11315 (L282_2214)	yiiX	2266949..2267557 (-)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
L282_RS11320 (L282_2215)	metJ	2267617..2267934 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=99833 L282_RS11300 WP_000644904.1 2263094..2264119(-) (cytR) [Escherichia coli APEC IMT5155]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=99833 L282_RS11300 WP_000644904.1 2263094..2264119(-) (cytR) [Escherichia coli APEC IMT5155]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628