Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EL020_RS04670 Genome accession   NZ_LR134203
Coordinates   897741..898226 (+) Length   161 a.a.
NCBI ID   WP_020916521.1    Uniprot ID   A0AB33AKU4
Organism   Streptococcus lutetiensis strain NCTC11436     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 892741..903226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL020_RS04645 (NCTC11436_00964) - 893274..893960 (+) 687 WP_058813782.1 tRNA (adenine(22)-N(1))-methyltransferase -
  EL020_RS04650 (NCTC11436_00965) - 893947..894735 (+) 789 WP_058813783.1 Nif3-like dinuclear metal center hexameric protein -
  EL020_RS04655 (NCTC11436_00966) rfbA 894868..895737 (+) 870 WP_020916518.1 glucose-1-phosphate thymidylyltransferase RfbA -
  EL020_RS04660 (NCTC11436_00967) - 895737..896330 (+) 594 WP_020916519.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  EL020_RS04665 (NCTC11436_00968) rfbB 896499..897548 (+) 1050 WP_126402436.1 dTDP-glucose 4,6-dehydratase -
  EL020_RS04670 (NCTC11436_00969) mutX 897741..898226 (+) 486 WP_020916521.1 NUDIX hydrolase Machinery gene
  EL020_RS04675 (NCTC11436_00970) - 898261..899448 (+) 1188 WP_111698377.1 AI-2E family transporter -
  EL020_RS04680 (NCTC11436_00971) - 899438..900673 (+) 1236 WP_020916523.1 tetratricopeptide repeat protein -
  EL020_RS04685 (NCTC11436_00972) - 900657..900833 (+) 177 WP_058813786.1 hypothetical protein -
  EL020_RS04690 (NCTC11436_00973) alsS 901103..902776 (+) 1674 WP_061407502.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 161 a.a.        Molecular weight: 18841.18 Da        Isoelectric Point: 4.4462

>NTDB_id=998240 EL020_RS04670 WP_020916521.1 897741..898226(+) (mutX) [Streptococcus lutetiensis strain NCTC11436]
MTKLATICYIDNGEALLLLHRNKKPNDVHEGKWISVGGKLEASETPDECAKREIFEETHFTVKEMDFKGVITFPEFTPGH
DWYTYVFKVTDFEGELISDEESREGTLEWVPYDKVLSKPTWEGDYEIFKWILDDVPFFSAKFTYDDKQRLVDKSVTFYGD
K

Nucleotide


Download         Length: 486 bp        

>NTDB_id=998240 EL020_RS04670 WP_020916521.1 897741..898226(+) (mutX) [Streptococcus lutetiensis strain NCTC11436]
ATGACAAAGTTAGCGACGATTTGTTATATTGATAACGGTGAGGCACTTTTGCTTTTGCATCGTAATAAAAAGCCAAACGA
TGTTCATGAGGGAAAATGGATTTCGGTTGGTGGTAAACTTGAAGCGAGTGAAACGCCTGATGAATGTGCCAAACGTGAAA
TTTTTGAAGAAACGCATTTTACAGTTAAGGAAATGGATTTTAAAGGTGTGATTACTTTCCCTGAATTTACGCCAGGTCAC
GATTGGTATACCTACGTCTTTAAGGTGACAGATTTTGAAGGTGAATTAATCTCTGACGAAGAATCACGTGAGGGTACTCT
TGAGTGGGTTCCTTATGATAAGGTGTTATCAAAACCAACTTGGGAAGGTGACTATGAAATCTTTAAGTGGATTTTAGATG
ATGTGCCATTCTTCTCAGCTAAGTTTACTTATGATGACAAGCAACGCTTGGTAGATAAGAGTGTTACTTTTTATGGTGAT
AAGTAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AB33AKU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.62

98.137

0.683