Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABDZ24_RS24895 Genome accession   NZ_CP155623
Coordinates   4748207..4748383 (-) Length   58 a.a.
NCBI ID   WP_009879752.1    Uniprot ID   A0A2A8KX43
Organism   Bacillus paramobilis strain N24509     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 4743207..4753383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABDZ24_RS24875 (ABDZ24_24950) - 4743851..4744597 (-) 747 WP_000966126.1 YjbA family protein -
  ABDZ24_RS24880 (ABDZ24_24955) - 4744742..4745530 (-) 789 WP_000513283.1 DUF2268 domain-containing putative Zn-dependent protease -
  ABDZ24_RS24885 (ABDZ24_24960) fabF 4745637..4746875 (-) 1239 WP_000412643.1 beta-ketoacyl-ACP synthase II -
  ABDZ24_RS24890 (ABDZ24_24965) fabH 4746907..4747839 (-) 933 WP_001100534.1 beta-ketoacyl-ACP synthase III -
  ABDZ24_RS24895 (ABDZ24_24970) comZ 4748207..4748383 (-) 177 WP_009879752.1 ComZ family protein Regulator
  ABDZ24_RS24900 (ABDZ24_24975) - 4748437..4749309 (-) 873 WP_120449684.1 NAD(P)-dependent oxidoreductase -
  ABDZ24_RS24905 (ABDZ24_24980) - 4749339..4750073 (-) 735 WP_098258248.1 alpha/beta hydrolase -
  ABDZ24_RS24910 (ABDZ24_24985) - 4750230..4750412 (+) 183 WP_001211113.1 YjzD family protein -
  ABDZ24_RS24915 (ABDZ24_24990) clpB 4750451..4753051 (-) 2601 WP_346817536.1 ATP-dependent chaperone ClpB -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.69 Da        Isoelectric Point: 4.3010

>NTDB_id=998148 ABDZ24_RS24895 WP_009879752.1 4748207..4748383(-) (comZ) [Bacillus paramobilis strain N24509]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADQE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=998148 ABDZ24_RS24895 WP_009879752.1 4748207..4748383(-) (comZ) [Bacillus paramobilis strain N24509]
ATGAATGAGAAAAGCATGCAATTTTTACAAATCGCAATGAAGCATTTACCAGAAGCAAAGGCCATTTTAGATGATAATGG
AATTGCTCTTGATATGGAGAAAGCACAACCAGTATTAGAGTTATTGATGAAAGTTATGAACGAAGCATATGAGCTTGGGA
AAGCAGATCAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment