Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   ABDZ24_RS10510 Genome accession   NZ_CP155623
Coordinates   1920934..1921392 (-) Length   152 a.a.
NCBI ID   WP_000804861.1    Uniprot ID   A0A164Q4K6
Organism   Bacillus paramobilis strain N24509     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1915934..1926392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABDZ24_RS10485 (ABDZ24_10505) - 1916429..1916929 (+) 501 WP_097843836.1 hypothetical protein -
  ABDZ24_RS10490 (ABDZ24_10510) tnpB 1917407..1918534 (+) 1128 WP_346817835.1 IS200/IS605 family element RNA-guided endonuclease TnpB -
  ABDZ24_RS10495 (ABDZ24_10515) - 1918512..1918775 (-) 264 WP_097844172.1 hypothetical protein -
  ABDZ24_RS10500 (ABDZ24_10520) - 1918939..1919580 (+) 642 WP_000680839.1 diguanylate cyclase -
  ABDZ24_RS10505 (ABDZ24_10525) - 1920240..1920902 (+) 663 WP_346817836.1 YkyA family protein -
  ABDZ24_RS10510 (ABDZ24_10530) kre 1920934..1921392 (-) 459 WP_000804861.1 YkyB family protein Regulator
  ABDZ24_RS10515 (ABDZ24_10535) ppx 1921570..1923108 (+) 1539 WP_098872131.1 exopolyphosphatase -
  ABDZ24_RS10520 (ABDZ24_10540) - 1923216..1925324 (+) 2109 WP_002072873.1 polyphosphate kinase -
  ABDZ24_RS10525 (ABDZ24_10545) - 1925501..1925737 (-) 237 WP_061678291.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17770.49 Da        Isoelectric Point: 10.6793

>NTDB_id=998133 ABDZ24_RS10510 WP_000804861.1 1920934..1921392(-) (kre) [Bacillus paramobilis strain N24509]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTNLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=998133 ABDZ24_RS10510 WP_000804861.1 1920934..1921392(-) (kre) [Bacillus paramobilis strain N24509]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATATTGGTTAAAAAAGACGGCTTTAGAACGCTTAATTGCTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTTTCTAGAAATCCACGCTTTAGCCAACAACAATCGGATGTTCTTATCCGTTTA
GGTGATTATTTTTTCCATATTCCTCCTACAAAAGAAGATTTTCGAATCCTACCACATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAAACTTATCTTTAACAGTAGCAAAAAAGACACTTCAAGATTATATTGGTCCTGAAGCACTGAAAC
AAGAGAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A164Q4K6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment