Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AAH949_RS01305 Genome accession   NZ_CP155620
Coordinates   250190..251365 (-) Length   391 a.a.
NCBI ID   WP_348518742.1    Uniprot ID   -
Organism   Campylobacter sp. CCS1377     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 245190..256365
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAH949_RS01285 (AAH949_01285) - 245783..247057 (-) 1275 WP_348518740.1 major outer membrane protein -
  AAH949_RS01290 (AAH949_01290) - 247225..247578 (-) 354 WP_348518741.1 hypothetical protein -
  AAH949_RS01295 (AAH949_01295) - 247575..248954 (-) 1380 WP_348519174.1 cytochrome P450 -
  AAH949_RS01300 (AAH949_01300) - 248960..250105 (-) 1146 WP_348519175.1 DUF829 domain-containing protein -
  AAH949_RS01305 (AAH949_01305) kpsS 250190..251365 (-) 1176 WP_348518742.1 capsule biosynthesis protein Regulator
  AAH949_RS01315 (AAH949_01315) - 251697..252947 (+) 1251 WP_348518743.1 adenylosuccinate synthase -
  AAH949_RS01320 (AAH949_01320) - 252944..253369 (+) 426 WP_348518744.1 flagellar export protein FliJ -
  AAH949_RS01325 (AAH949_01325) - 253362..253901 (+) 540 WP_348518745.1 MotE family protein -
  AAH949_RS01330 (AAH949_01330) - 253998..254549 (+) 552 WP_134237579.1 DUF507 family protein -
  AAH949_RS01335 (AAH949_01335) carA 254546..255664 (+) 1119 WP_134237580.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit -
  AAH949_RS01340 (AAH949_01340) - 255661..256317 (+) 657 WP_134237581.1 sulfite exporter TauE/SafE family protein -

Sequence


Protein


Download         Length: 391 a.a.        Molecular weight: 46325.81 Da        Isoelectric Point: 9.9906

>NTDB_id=998060 AAH949_RS01305 WP_348518742.1 250190..251365(-) (kpsS) [Campylobacter sp. CCS1377]
MNFNEKIEKELSNKNVTLLQGPIGNFFTHLSKRLQKYNAKVSKINFTGGDFIFYPKGKKYKGSKENLALFYENFFKQHNT
QAIIMYNDCRFIHSTAIGVAKKLNIEIWIFEEGYLRPYCITFEKNGVNANSQIPRNKEFYLYNHFNDDLKIKEIPGAFKF
MGFYAFLYWLFSFLLAPFFNNKLHHRTLNPLECLIWLRSLIRKYYYKISEKKLNNKIANLEKKYFLAILQVYNDTQILFH
YQKSIEDFIEETILSFANHARAKSYLIFKHHPMDRGYRNYAKLITELSEKYRVEGRILYVHDSYLPRLLKNALGCITINS
TVGLSAILEGCPTKVCGKAFYDIEGLSYPKKLHSFWKEAHAYKPNPKIQHNFKQYLLKINQINGNFYKNIF

Nucleotide


Download         Length: 1176 bp        

>NTDB_id=998060 AAH949_RS01305 WP_348518742.1 250190..251365(-) (kpsS) [Campylobacter sp. CCS1377]
ATGAATTTTAATGAAAAAATAGAAAAAGAATTAAGCAATAAAAACGTAACTCTTTTACAAGGTCCCATAGGTAATTTTTT
TACCCACCTTTCTAAAAGATTGCAAAAATATAATGCTAAAGTCAGCAAGATTAACTTCACAGGCGGGGATTTCATTTTCT
ATCCAAAAGGAAAAAAATATAAAGGTTCTAAAGAAAATTTGGCTTTGTTTTATGAAAATTTCTTTAAACAACACAATACT
CAAGCCATTATTATGTATAATGATTGTCGTTTTATTCATAGCACAGCTATTGGGGTGGCTAAAAAATTAAATATCGAAAT
TTGGATTTTTGAAGAAGGCTATCTTAGACCATATTGCATTACTTTTGAAAAAAACGGAGTCAATGCAAATTCGCAAATTC
CTAGAAATAAAGAATTTTATCTCTATAATCATTTCAATGACGATTTAAAAATCAAAGAAATTCCAGGTGCGTTCAAATTT
ATGGGTTTTTACGCGTTTTTATATTGGCTTTTTTCTTTTTTACTTGCACCATTTTTCAACAACAAACTCCACCATCGCAC
GCTAAATCCTTTAGAATGCTTGATTTGGTTGCGTTCTTTAATTAGAAAATATTATTATAAAATCAGCGAAAAAAAATTAA
ACAATAAAATTGCAAATTTAGAAAAAAAGTATTTTCTTGCCATTTTGCAAGTTTATAATGACACGCAAATTTTATTTCAT
TATCAAAAAAGCATTGAAGATTTCATTGAAGAAACCATACTTTCTTTTGCAAATCACGCAAGAGCAAAGTCTTATTTGAT
TTTTAAGCATCATCCTATGGATCGTGGTTATAGAAATTACGCTAAATTAATCACCGAACTCAGTGAAAAATACCGTGTTG
AAGGAAGAATTTTATATGTACATGATAGCTATCTACCACGTCTTTTAAAAAATGCGCTAGGCTGCATTACCATAAATTCA
ACAGTAGGTCTTAGTGCTATTTTAGAAGGTTGTCCGACTAAGGTTTGCGGAAAAGCATTTTACGATATAGAAGGTTTAAG
CTATCCTAAAAAACTTCATTCTTTTTGGAAAGAAGCACATGCTTATAAACCAAATCCAAAAATTCAACATAACTTCAAAC
AATATCTCTTAAAAATAAATCAAATCAATGGAAATTTTTATAAAAACATTTTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

71.867

100

0.719


Multiple sequence alignment