Detailed information NTG0998033

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ELZ63_RS01075
• Genome accession: NZ_LR134171
• Coordinates: 215220..216218 (-)
• Length: 332 a.a.
• NCBI ID: WP_005686992.1
• Uniprot ID: A0ABY1VT38
• Organism: Haemophilus influenzae strain NCTC12699
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 210220..221218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ63_RS01050 (NCTC12699_00207)	tehA	211194..212138 (+)	945	WP_048950225.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
ELZ63_RS01055 (NCTC12699_00208)	tsaA	212191..212910 (-)	720	WP_005664509.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
ELZ63_RS01060 (NCTC12699_00209)	menA	212972..213883 (+)	912	WP_061724264.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
ELZ63_RS01065 (NCTC12699_00210)	rraA	213935..214423 (+)	489	WP_005649446.1	ribonuclease E activity regulator RraA	-
ELZ63_RS01070 (NCTC12699_00211)	-	214563..215114 (-)	552	WP_005649445.1	TIGR00645 family protein	-
ELZ63_RS01075 (NCTC12699_00212)	cytR	215220..216218 (-)	999	WP_005686992.1	substrate-binding domain-containing protein	Regulator
ELZ63_RS01080 (NCTC12699_00213)	rbsK	216246..217166 (-)	921	WP_061724262.1	ribokinase	-
ELZ63_RS01085 (NCTC12699_00214)	rbsB	217264..218142 (-)	879	WP_005649439.1	ribose ABC transporter substrate-binding protein RbsB	-
ELZ63_RS01090 (NCTC12699_00215)	rbsC	218162..219130 (-)	969	WP_005664522.1	ribose ABC transporter permease	-
ELZ63_RS01095 (NCTC12699_00216)	rbsA	219146..220627 (-)	1482	WP_061724261.1	ribose ABC transporter ATP-binding protein RbsA	-
ELZ63_RS01100 (NCTC12699_00217)	rbsD	220641..221060 (-)	420	WP_061724260.1	D-ribose pyranase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36749.46 Da
• Isoelectric Point: 7.9562

>NTDB_id=998033 ELZ63_RS01075 WP_005686992.1 215220..216218(-) (cytR) [Haemophilus influenzae strain NCTC12699]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQKNQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=998033 ELZ63_RS01075 WP_005686992.1 215220..216218(-) (cytR) [Haemophilus influenzae strain NCTC12699]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGCC
TTAAGGTGCGCGAAACCAAAACTATCGGACTACTTGTCACCGCAACAAATAATCCCTTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGAAAAATCAATATAATCTTATTATTGCTACAACGGGTGGAGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTTTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCTCTGCCACTGGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATCGATGCAGGACATCGTAAAATTGGCATTATTACGGGGAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTTGGTGCATATCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTTTTAGAACCA
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361