Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABFB11_RS17315 Genome accession   NZ_CP155580
Coordinates   3735694..3736095 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas maltophilia isolate S62     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3730694..3741095
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFB11_RS17300 (ABFB11_17300) - 3732705..3734741 (-) 2037 WP_049431794.1 methyl-accepting chemotaxis protein -
  ABFB11_RS17305 (ABFB11_17305) - 3734783..3735313 (-) 531 WP_049431795.1 chemotaxis protein CheW -
  ABFB11_RS17310 (ABFB11_17310) - 3735313..3735675 (-) 363 WP_014648093.1 response regulator -
  ABFB11_RS17315 (ABFB11_17315) pilG 3735694..3736095 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  ABFB11_RS17320 (ABFB11_17320) gshB 3736335..3737282 (+) 948 WP_012511876.1 glutathione synthase -
  ABFB11_RS17325 (ABFB11_17325) - 3737282..3738166 (+) 885 WP_049431798.1 energy transducer TonB -
  ABFB11_RS17330 (ABFB11_17330) tsaB 3738742..3739455 (-) 714 WP_343368552.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=997935 ABFB11_RS17315 WP_005418455.1 3735694..3736095(-) (pilG) [Stenotrophomonas maltophilia isolate S62]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=997935 ABFB11_RS17315 WP_005418455.1 3735694..3736095(-) (pilG) [Stenotrophomonas maltophilia isolate S62]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCGAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGCGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTCTCGTCCAAGGATGGGCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAATACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment