Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   SriyCCGPB3_RS16440 Genome accession   NZ_CP155568
Coordinates   3532998..3533399 (-) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas riyadhensis strain ESTM1A_MKCTX4_10a     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3527998..3538399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SriyCCGPB3_RS16425 (SriyCCGPB3_003279) - 3530009..3532045 (-) 2037 WP_032130100.1 methyl-accepting chemotaxis protein -
  SriyCCGPB3_RS16430 (SriyCCGPB3_003280) - 3532087..3532617 (-) 531 WP_005410716.1 chemotaxis protein CheW -
  SriyCCGPB3_RS16435 (SriyCCGPB3_003281) - 3532617..3532979 (-) 363 WP_005410717.1 response regulator -
  SriyCCGPB3_RS16440 (SriyCCGPB3_003282) pilG 3532998..3533399 (-) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  SriyCCGPB3_RS16445 (SriyCCGPB3_003283) gshB 3533640..3534587 (+) 948 WP_153855727.1 glutathione synthase -
  SriyCCGPB3_RS16450 (SriyCCGPB3_003284) - 3534587..3535471 (+) 885 WP_110713262.1 energy transducer TonB -
  SriyCCGPB3_RS16455 (SriyCCGPB3_003285) tsaB 3535959..3536672 (-) 714 WP_153855726.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=997814 SriyCCGPB3_RS16440 WP_005418455.1 3532998..3533399(-) (pilG) [Stenotrophomonas riyadhensis strain ESTM1A_MKCTX4_10a]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=997814 SriyCCGPB3_RS16440 WP_005418455.1 3532998..3533399(-) (pilG) [Stenotrophomonas riyadhensis strain ESTM1A_MKCTX4_10a]
ATGACTGAAAACACGACTGCGGGCGGGGAACTCGCAGGACTCCGGGTGATGGTCATCGATGATTCGAAGACCATCCGCAG
GACTGCGGAAACGCTGCTCAAGCGCGAAGGCTGCGAGGTGGTCACCGCCACCGACGGCTTCGAAGCGCTTGCCAAGATCG
CAGACCAGCAACCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGACGGGTACCAGACCTGTGCGCTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTCATCATGCTGTCGTCCAAGGATGGCCTGTTCGACAAGGCGCGGGGACGCAT
CGTCGGCTCGGAGCAGTACCTGACGAAGCCTTTCACGCGTGAAGAACTGCTGGGTGCCATCCGCACATACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677

Multiple sequence alignment