Detailed information NTG0997772

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: KZZ19_RS25425
• Genome accession: NZ_CP155559
• Coordinates: 4881002..4882351 (-)
• Length: 449 a.a.
• NCBI ID: WP_088098406.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain HSY204
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4876002..4887351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZZ19_RS25405 (KZZ19_025400)	secA	4876327..4878834 (-)	2508	WP_088098402.1	preprotein translocase subunit SecA	-
KZZ19_RS25410 (KZZ19_025405)	raiA	4879109..4879651 (-)	543	WP_000671193.1	ribosome-associated translation inhibitor RaiA	-
KZZ19_RS25415 (KZZ19_025410)	cspC	4879974..4880171 (-)	198	WP_044439520.1	cold shock protein CspC	-
KZZ19_RS25420 (KZZ19_025415)	-	4880298..4881002 (-)	705	WP_237981265.1	ComF family protein	-
KZZ19_RS25425 (KZZ19_025420)	comFA	4881002..4882351 (-)	1350	WP_088098406.1	ATP-dependent helicase ComFA	Machinery gene
KZZ19_RS25430 (KZZ19_025425)	-	4882479..4883771 (-)	1293	WP_088098407.1	C40 family peptidase	-
KZZ19_RS25435 (KZZ19_025430)	-	4884024..4884338 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
KZZ19_RS25440 (KZZ19_025435)	-	4884512..4885354 (-)	843	WP_088098409.1	DegV family protein	-
KZZ19_RS25445 (KZZ19_025440)	-	4885594..4886229 (+)	636	WP_061679333.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51328.08 Da
• Isoelectric Point: 9.7289

>NTDB_id=997772 KZZ19_RS25425 WP_088098406.1 4881002..4882351(-) (comFA) [Bacillus thuringiensis strain HSY204]
MLAGKQLLLEELSSDLRDTLQELKKKREVVCVQGVIKKASKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRWIAERKGEKSLNPLQWNGTLSTGQELAAQGVIEAIKQKDSFFIWAVCGAGKTEMLFYGMEEALRKGERVCIAT
PRTDVVLELAPRLQKVFPNVNVASLYGGSEDRDKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRSGKQKGIIVSGRYHRHPLPVPLFCWCGNWKKSLHHKKIPRVLLQWLEMYVNKKHPIFL
FVPHVRYIEELSLILKTLDHRIDGVHAEDPMRKEKVAAFRKGEIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVIYFHYGKTEAMVRAKKHIQSMNKKAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=997772 KZZ19_RS25425 WP_088098406.1 4881002..4882351(-) (comFA) [Bacillus thuringiensis strain HSY204]
ATGTTAGCAGGGAAACAGTTACTATTAGAGGAACTCTCTTCAGATTTACGGGATACATTACAAGAGTTGAAAAAGAAGAG
GGAGGTCGTATGTGTACAAGGTGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGTAATATAGAGCAGCGGC
TATTTGCGTCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGGGTAAGT
GAATGTGCTGTACTCGTTCGTTGGATTGCTGAAAGAAAAGGAGAAAAAAGTTTAAATCCATTACAGTGGAATGGGACTTT
GTCTACCGGTCAGGAGTTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGCAGAAAGACTCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAGACAGAAATGTTATTTTACGGTATGGAAGAGGCATTGCGAAAAGGAGAAAGAGTTTGTATCGCAACG
CCCAGAACAGACGTTGTACTGGAATTAGCGCCGAGATTACAAAAAGTGTTTCCAAATGTAAATGTAGCTTCCTTATACGG
AGGAAGTGAAGATAGGGACAAAGATGCAGCGTTAGTAGTTGCAACGACTCATCAATTGTTACGTTACTATAGAGCATTTC
ATGTCATGATTGTAGATGAGATAGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAACAAGCAATG
AAAGAGAAAGCGGCACGTATTTATTTAACGGCAACTCCCGATGAAAAGTGGAAGCGTAATTTCAGAAGCGGGAAACAAAA
AGGTATTATTGTCTCAGGGCGATACCATCGTCACCCGTTACCAGTTCCTCTATTTTGCTGGTGCGGAAATTGGAAGAAAA
GCCTTCATCATAAAAAAATCCCTCGAGTTTTACTACAATGGTTAGAAATGTACGTAAACAAAAAACATCCCATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAATTGAGCCTGATATTGAAAACGTTGGATCATAGAATCGATGGTGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTAGCAGCTTTCAGAAAGGGAGAAATTCCGTTATTAGTTACAACGACAATTTTAG
AGAGAGGAGTAACGGTGAAGAATTTACAAGTTGCGGTGTTAGGAGCAGAAGAAGAAATATTTTCAGAAAGCGCGCTCGTA
CAAATTGCAGGTCGAGCAGGTCGTAGTTTTGAAGAACCTTATGGTGAGGTTATTTATTTTCATTACGGTAAGACAGAGGC
GATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAAGGCAAAAGAACAAGGGTTAATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (107-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	50.905	98.441	0.501