Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   KZZ19_RS19475 Genome accession   NZ_CP155559
Coordinates   3788205..3788663 (+) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus thuringiensis strain HSY204     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3783205..3793663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZZ19_RS19460 (KZZ19_019455) - 3783862..3784098 (+) 237 WP_048563234.1 hypothetical protein -
  KZZ19_RS19465 (KZZ19_019460) - 3784273..3786381 (-) 2109 WP_088097577.1 polyphosphate kinase -
  KZZ19_RS19470 (KZZ19_019465) - 3786489..3788027 (-) 1539 WP_237979399.1 Ppx/GppA family phosphatase -
  KZZ19_RS19475 (KZZ19_019470) kre 3788205..3788663 (+) 459 WP_000804864.1 YkyB family protein Regulator
  KZZ19_RS19480 (KZZ19_019475) - 3788696..3789358 (-) 663 WP_088097579.1 YkyA family protein -
  KZZ19_RS19485 (KZZ19_019480) - 3790008..3790649 (-) 642 WP_088097580.1 diguanylate cyclase -
  KZZ19_RS19490 (KZZ19_019485) - 3790813..3791046 (+) 234 WP_237979400.1 SPP1 phage holin family protein -
  KZZ19_RS19495 (KZZ19_019490) - 3791079..3791579 (-) 501 WP_048546157.1 hypothetical protein -
  KZZ19_RS19500 (KZZ19_019495) - 3792000..3793541 (+) 1542 WP_237979401.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=997757 KZZ19_RS19475 WP_000804864.1 3788205..3788663(+) (kre) [Bacillus thuringiensis strain HSY204]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=997757 KZZ19_RS19475 WP_000804864.1 3788205..3788663(+) (kre) [Bacillus thuringiensis strain HSY204]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCTGCAACTAATCCGAAGTATTTATACTGGTTAAAAAAGACGGCTTTAGAACGCTTAATTGCTGAAA
AAAAAGCTATTAAAGAAGGATTACATTTTTCTAGAAATCCACGTTTTAGCCAACAACAATCTGATGTTCTTATACGTTTA
GGTGATTATTTTTTCCATATTCCTCCTACCAAAGAAGATTTTCGAATCCTACCACATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCACTGAAAC
AAGAAAAAAAATTAAGTGAACCTGTCCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493

Multiple sequence alignment