Detailed information    

insolico Bioinformatically predicted

Overview

Name   abrB   Type   Regulator
Locus tag   KZZ19_RS09710 Genome accession   NZ_CP155559
Coordinates   1882918..1883205 (+) Length   95 a.a.
NCBI ID   WP_000648284.1    Uniprot ID   A0A161TTF2
Organism   Bacillus thuringiensis strain HSY204     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context

Location: 1877918..1888205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KZZ19_RS09690 (KZZ19_009690) - 1879100..1879297 (+) 198 WP_087980271.1 DUF4083 domain-containing protein -
  KZZ19_RS09695 (KZZ19_009695) - 1879328..1879789 (+) 462 WP_088096095.1 NUDIX hydrolase -
  KZZ19_RS09700 (KZZ19_009700) nadE 1879833..1880651 (-) 819 WP_088096096.1 ammonia-dependent NAD(+) synthetase -
  KZZ19_RS09705 (KZZ19_009705) - 1880922..1882802 (+) 1881 WP_237980922.1 ABC transporter permease -
  KZZ19_RS09710 (KZZ19_009710) abrB 1882918..1883205 (+) 288 WP_000648284.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  KZZ19_RS09715 (KZZ19_009715) - 1883486..1884436 (+) 951 WP_237980923.1 serine protease -
  KZZ19_RS09720 (KZZ19_009720) ugpC 1884646..1885749 (-) 1104 WP_237980924.1 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC -
  KZZ19_RS09725 (KZZ19_009725) - 1886030..1886893 (-) 864 WP_237980925.1 helix-turn-helix domain-containing protein -
  KZZ19_RS09730 (KZZ19_009730) - 1886963..1887823 (-) 861 WP_088096101.1 AraC family transcriptional regulator -

Sequence

Protein


Download         Length: 95 a.a.        Molecular weight: 10648.40 Da        Isoelectric Point: 5.8692

>NTDB_id=997746 KZZ19_RS09710 WP_000648284.1 1882918..1883205(+) (abrB) [Bacillus thuringiensis strain HSY204]
MKATGIIRKVDELGRIVIPKELREVLGIQIKSPLEIFVEEEKIILQKYQPYNACQITGDVSDQNISLANGNITVSIDGAK
HLIKEIEKFLNKSEA

Nucleotide


Download         Length: 288 bp        

>NTDB_id=997746 KZZ19_RS09710 WP_000648284.1 1882918..1883205(+) (abrB) [Bacillus thuringiensis strain HSY204]
ATGAAAGCAACAGGAATTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAGTTACGAGAAGTATTAGG
AATACAAATTAAATCACCACTTGAAATTTTCGTAGAAGAAGAAAAAATCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAGATCAAAACATATCATTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
CATTTAATAAAAGAAATAGAGAAGTTTTTAAATAAGAGTGAGGCTTAG

Domains

Predicted by InterproScan.

Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin)

(8-49)

AbrB C-terminal domain (AbrB_C)

(53-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A161TTF2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

58.889

94.737

0.558

Multiple sequence alignment