Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ELZ51_RS06620 Genome accession   NZ_LR134094
Coordinates   1293008..1293487 (-) Length   159 a.a.
NCBI ID   WP_126426753.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1288008..1298487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS06605 (NCTC4669_01411) - 1288825..1290477 (+) 1653 WP_126426747.1 NFACT family protein -
  ELZ51_RS06610 (NCTC4669_01412) - 1290540..1291787 (-) 1248 WP_126426749.1 tetratricopeptide repeat protein -
  ELZ51_RS06615 (NCTC4669_01413) - 1291777..1292958 (-) 1182 WP_126426751.1 AI-2E family transporter -
  ELZ51_RS06620 (NCTC4669_01414) mutX 1293008..1293487 (-) 480 WP_126426753.1 NUDIX hydrolase Machinery gene
  ELZ51_RS06625 (NCTC4669_01415) - 1293684..1293875 (+) 192 WP_126426755.1 hypothetical protein -
  ELZ51_RS11700 - 1293967..1294250 (-) 284 Protein_1269 lysostaphin resistance A-like protein -
  ELZ51_RS11370 - 1294257..1294589 (-) 333 WP_003051226.1 hypothetical protein -
  ELZ51_RS06635 (NCTC4669_01416) rfbB 1294880..1295923 (-) 1044 WP_111716810.1 dTDP-glucose 4,6-dehydratase -
  ELZ51_RS06640 (NCTC4669_01417) - 1296168..1296761 (-) 594 WP_126426757.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  ELZ51_RS06645 (NCTC4669_01418) rfbA 1296761..1297630 (-) 870 WP_003051238.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18505.69 Da        Isoelectric Point: 4.2471

>NTDB_id=997746 ELZ51_RS06620 WP_126426753.1 1293008..1293487(-) (mutX) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTAGH
DWYTYVFKVTGFEGELISDADSREGTLEWVPYEQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=997746 ELZ51_RS06620 WP_126426753.1 1293008..1293487(-) (mutX) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGTAAGTGGATTTCAGTAGGAGGCAAGCTTGAAGCAGGCGAGACTCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACAGCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGGGAGCTTATTTCGGATGCTGACTCACGAGAGGGAACCTT
GGAATGGGTGCCTTACGAACAAGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAGG
ATCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

67.925

100

0.679

Multiple sequence alignment