Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   ELZ51_RS05540 Genome accession   NZ_LR134094
Coordinates   1069321..1070391 (+) Length   356 a.a.
NCBI ID   WP_126426534.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1064321..1075391
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS05515 (NCTC4669_01161) - 1064344..1065027 (+) 684 WP_126426523.1 ABC transporter ATP-binding protein -
  ELZ51_RS05520 (NCTC4669_01162) - 1065106..1065798 (+) 693 WP_126426525.1 response regulator transcription factor -
  ELZ51_RS05525 (NCTC4669_01163) - 1065782..1066849 (+) 1068 WP_126426527.1 sensor histidine kinase -
  ELZ51_RS05530 (NCTC4669_01164) - 1066980..1067402 (+) 423 WP_126426529.1 cupin domain-containing protein -
  ELZ51_RS05535 (NCTC4669_01165) - 1067432..1068676 (-) 1245 WP_126426532.1 peptidoglycan bridge formation glycyltransferase FemA/FemB family protein -
  ELZ51_RS05540 (NCTC4669_01166) xerS 1069321..1070391 (+) 1071 WP_126426534.1 tyrosine recombinase XerS Machinery gene
  ELZ51_RS05545 (NCTC4669_01167) - 1070468..1070908 (+) 441 WP_126426536.1 NusG domain II-containing protein -
  ELZ51_RS05550 (NCTC4669_01168) - 1070980..1071930 (-) 951 WP_126426538.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  ELZ51_RS05555 (NCTC4669_01169) - 1071920..1072972 (-) 1053 WP_126426540.1 FAD:protein FMN transferase -
  ELZ51_RS05560 (NCTC4669_01170) - 1073043..1073549 (-) 507 WP_037585112.1 FMN-binding protein -
  ELZ51_RS05565 (NCTC4669_01171) - 1073640..1074638 (-) 999 WP_003050642.1 polyprenyl synthetase family protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41414.66 Da        Isoelectric Point: 9.6221

>NTDB_id=997739 ELZ51_RS05540 WP_126426534.1 1069321..1070391(+) (xerS) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MRRDLLLEKIETYKAIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTDATVIADIDLATLEHLTKKDLE
TFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENNQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMGFLEYVDKDYELKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMVIEVIRKGGKRDS
VNVAGFAKPYLEAYLAIRKNRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=997739 ELZ51_RS05540 WP_126426534.1 1069321..1070391(+) (xerS) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGAGACGTGATTTATTACTCGAAAAAATTGAAACTTATAAAGCTATCATGCCTTGGTATGTGTTAGAATACTATCAGTC
AAAATTGGCTGTCCCATACAGTTTTACAACGCTATATGAGTATTTAAAAGAATACAAACGTTTTTTTGACTGGTTAATGG
ATGCTGACTTAACGGATGCGACTGTCATTGCTGATATCGATTTAGCGACTCTTGAACACCTGACTAAGAAAGATTTAGAG
ACCTTTGTTCTGTACCTAAGAGAACGCCCTTCTCTTAATACTTATTCCACCAAAGAGGGTCTTTCTCAAACAACGATTAA
TCGCACTTTGTCTGCTTTATCAAGCCTTTATAAATATTTGACTGAAGAGGTTGAAAATAATCAGGGAGAGCCTTATTTCT
ATCGGAATGTCATGAAGAAGGTATCCACGAAGAAGAAAAAAGAAACCCTAGCTTCTAGAGCTGAAAACATTAAACAAAAG
CTTTTTTTAGGGGATGAAACCATGGGTTTTCTAGAGTATGTAGATAAGGACTATGAACTCAAATTATCCAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAAGAGAGAGACCTAGCTATTATTGCCCTACTACTGGCCTCAGGAGTTCGTCTATCAGAAG
CCGTTAATCTTGATTTAAAAGATGTTAACCTTAATATGATGGTTATTGAGGTTATCCGCAAAGGGGGAAAACGAGATTCA
GTGAATGTTGCAGGTTTTGCTAAACCTTATTTAGAAGCTTATCTGGCTATTCGCAAGAATCGTTATAAGGCTGAAAAACA
AGACCTTGCTTTCTTTTTAACGGAATATCGAGGGGTTCCTAATCGCATGGACGCCTCCAGTATTGAAAAAATGGTTGGTA
AATACTCTCAAGATTTTAAAATTCGTGTGACTCCCCATAAGTTACGACACACATTAGCCACACGTCTTTATGATGCGACC
AAGTCCCAGGTTTTGGTCAGTCATCAATTGGGGCATGCATCGACTCAAGTTACCGATTTGTATACCCATATTGTTAACGA
TGAACAAAAAAACGCCTTAGACAAATTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.337

100

0.803