Detailed information NTG0997737

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: KZZ19_RS05900
• Genome accession: NZ_CP155559
• Coordinates: 1147858..1150458 (+)
• Length: 866 a.a.
• NCBI ID: WP_237979834.1
• Uniprot ID: -
• Organism: Bacillus thuringiensis strain HSY204
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1142858..1155458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KZZ19_RS05865 (KZZ19_005865)	prsA	1143618..1144475 (-)	858	WP_237979833.1	peptidylprolyl isomerase PrsA	-
KZZ19_RS05870 (KZZ19_005870)	-	1144606..1144737 (-)	132	WP_001120851.1	DUF3941 domain-containing protein	-
KZZ19_RS05875 (KZZ19_005875)	-	1144838..1145695 (+)	858	WP_088095531.1	YitT family protein	-
KZZ19_RS05880 (KZZ19_005880)	-	1145721..1145918 (-)	198	WP_000527404.1	DUF3813 domain-containing protein	-
KZZ19_RS05885 (KZZ19_005885)	-	1145919..1146059 (-)	141	WP_000516816.1	hypothetical protein	-
KZZ19_RS05890 (KZZ19_005890)	-	1146164..1146973 (-)	810	WP_071721617.1	Cof-type HAD-IIB family hydrolase	-
KZZ19_RS05895 (KZZ19_005895)	-	1147467..1147646 (+)	180	WP_000531422.1	YjzC family protein	-
KZZ19_RS05900 (KZZ19_005900)	clpC	1147858..1150458 (+)	2601	WP_237979834.1	ATP-dependent chaperone ClpB	Regulator
KZZ19_RS05905 (KZZ19_005905)	-	1150494..1150676 (-)	183	WP_001211111.1	YjzD family protein	-
KZZ19_RS05910 (KZZ19_005910)	-	1150833..1151567 (+)	735	WP_237979835.1	alpha/beta hydrolase	-
KZZ19_RS05915 (KZZ19_005915)	-	1151597..1152469 (+)	873	WP_140392379.1	NAD(P)-dependent oxidoreductase	-
KZZ19_RS05920 (KZZ19_005920)	comZ	1152523..1152699 (+)	177	WP_009879752.1	ComZ family protein	Regulator
KZZ19_RS05925 (KZZ19_005925)	fabH	1152939..1153871 (+)	933	WP_001100533.1	beta-ketoacyl-ACP synthase III	-
KZZ19_RS05930 (KZZ19_005930)	fabF	1153903..1155141 (+)	1239	WP_237979836.1	beta-ketoacyl-ACP synthase II	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97348.33 Da
• Isoelectric Point: 5.1906

>NTDB_id=997737 KZZ19_RS05900 WP_237979834.1 1147858..1150458(+) (clpC) [Bacillus thuringiensis strain HSY204]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
AGKLYITGALQQLLVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLLTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKEKDFGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSDRVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLETDGSIKEGSRELVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVQELQGRLADRHIT
LELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=997737 KZZ19_RS05900 WP_237979834.1 1147858..1150458(+) (clpC) [Bacillus thuringiensis strain HSY204]
ATGGACTTAAATCAAATGACAACGAAAACACAAGAAGCGATTATGAGTGCCCAATCTTTAGCGGTGTCTCATCATCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCGGTACGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAACAAGGCGCCGAAAGTTTAATTAAGAAAAAACCTTCTGTAACGGGAAGCGGTGCAGAA
GCAGGAAAATTATATATAACAGGTGCTCTGCAACAACTACTTGTAAGAGCAGGGAAAGAAGCGGAGAAATTGCAAGATGA
CTACATTTCAGTTGAACATGTACTACTTGCTTTTTCTGAAGAAAAAGGCGATATAAATCAATTACTTACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCGGAAGTAAGAGCGGGGAAAATTGACCCTGTTATCGGCCGCGA
TAGTGAAATTCGCCGCGTAATTCGCATTCTTTCACGTAAAACGAAAAACAACCCGGTTTTAATTGGTGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGATTAGCACAGCGTATTGTGAAAAAGGATGTACCAGAGGGGTTAAAAGATAGAACAATC
TTTGCATTAGATATGAGTGCGCTTGTAGCTGGAGCGAAATTCCGTGGTGAATTTGAAGAGCGCCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGCCGCATTTTATTATTCATTGATGAACTTCATACAATCGTCGGCGCTGGTAAAACAGAAG
GTGCGATGGACGCAGGAAATATGTTGAAACCGATGCTTGCGCGTGGTGAACTGCATTGCATTGGGGCGACGACGCTCGAT
GAATATCGTAAATATATTGAGAAAGATCCAGCGCTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGCTTTGAAATTTATCATGGTGTAAATATTCATGACCGCGCGATTG
TAGCAGCATCTGTTTTATCAGATCGATATATTTCGGATCGTTTCTTACCAGATAAAGCAATTGATCTTGTTGATGAAGCG
TGTGCAACAATTCGAACAGAGATTGATTCTATGCCAACGGAATTAGATGAAGTAACGCGCCGCATTATGCAGCTGGAGAT
TGAAGAAGCAGCTCTTGGAAAAGAGAAGGACTTTGGTAGCCAAGAACGTCTAAAAACGTTGCAACGTGAATTATCGGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGATATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAGCGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGATTTAAATAAAGCAGCGGAACTTCGCCACGG
GAAAATTCCTGCAATTGAAAAAGAGTTAAAAGAAGCAGAAGAAATGGGCGCACATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAGATTGCTGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCAAAACTCGTTGAAGGT
GAACGCGAGAAATTACTACGCTTAGAGCAAATTTTATCAGATCGTGTAATCGGACAAGAGGAAGCGGTAAGTTTAGTATC
AGACGCAGTTCTTCGTGCACGCGCTGGTATTAAAGACCCGAACCGTCCAATTGGTTCCTTCATCTTCTTAGGACCGACAG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGTATCGACATG
TCTGAGTATATGGAGAAACACGCTGTGTCACGCTTAATTGGTGCGCCTCCTGGATATGTTGGATATGAAGAGGGTGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCGTATTCAGTTATTTTGTTAGACGAAATCGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGACGCATTACAGATTCGCAAGGACGTACAGTAGACTTTAAAAACACGGTTATT
ATTATGACTTCAAATATTGGGTCTGCTCATTTGTTAGATGGATTAGAAACAGATGGCTCAATTAAAGAGGGATCAAGAGA
ACTTGTAATGGGGCAATTAAGAGGACATTTCCGACCAGAGTTTTTAAATCGTGTCGATGAAATTATTTTATTCAAACCTC
TTACAACAAATGAAATTAAAGGTATTGTTGATAAGATTGTACAAGAATTACAAGGTCGTTTAGCTGACCGTCATATTACG
TTAGAATTAACAGATGCAGCGAAAGAGTTTGTTGTAGAAGCTGGCTTTGATCCGATGTACGGAGCTCGTCCATTAAAACG
ATATGTACAACGTCAAGTTGAGACGAAATTAGCGAGAGAATTAATTGCAGGGACGATTACTGATAACAGTCACGTAGTTG
TTGATGTAGAAAATAACGAATTAGTCGTTCATGTAAAGTAA

Domains

Predicted by InterproScan.

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• AAA lid domain (AAA_lid_9) (345-447)

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.543	100	0.48
clpC	Lactococcus lactis subsp. cremoris KW2	47.479	82.448	0.391