Detailed information    

insolico Bioinformatically predicted

Overview

Name   recO   Type   Machinery gene
Locus tag   ELZ51_RS00285 Genome accession   NZ_LR134094
Coordinates   36685..37449 (+) Length   254 a.a.
NCBI ID   WP_003049037.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 31685..42449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ51_RS00265 - 31943..32428 (-) 486 Protein_18 transposase -
  ELZ51_RS00275 (NCTC4669_00055) pcsB 34130..35326 (+) 1197 WP_126425568.1 peptidoglycan hydrolase PcsB -
  ELZ51_RS00280 (NCTC4669_00056) - 35493..36458 (+) 966 WP_126425570.1 ribose-phosphate diphosphokinase -
  ELZ51_RS00285 (NCTC4669_00057) recO 36685..37449 (+) 765 WP_003049037.1 DNA repair protein RecO Machinery gene
  ELZ51_RS00290 (NCTC4669_00058) plsX 37556..38563 (+) 1008 WP_126425572.1 phosphate acyltransferase PlsX -
  ELZ51_RS00295 (NCTC4669_00059) - 38556..38798 (+) 243 WP_003049042.1 phosphopantetheine-binding protein -
  ELZ51_RS00300 - 38872..40127 (-) 1256 Protein_25 ISL3 family transposase -
  ELZ51_RS00305 (NCTC4669_00062) purC 40381..41091 (+) 711 WP_126425574.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 29985.18 Da        Isoelectric Point: 5.7481

>NTDB_id=997692 ELZ51_RS00285 WP_003049037.1 36685..37449(+) (recO) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MQLNESLGIVLFNRNYREDDKLVKIFTEAAGKRMFFVKHISRSKLSSVIQPLTAADFIFKLNESGLSYIDDYNHVDTYQQ
INQDLFRLSYASYVVALADAAISDNEPDPHLFAFLKKTLDLMEEGLDYEVLTNIFEIQVLERFGIRINFHDCVFCHRVGL
PFDFSHHYSGVLCPEHYHKDDYRNHLDPNVIYLLDRFQTIQFDELRTISLNDEMKRKLRYFIDELYHDYVGIKLKSKTFI
DDLAKWGDIMKPKD

Nucleotide


Download         Length: 765 bp        

>NTDB_id=997692 ELZ51_RS00285 WP_003049037.1 36685..37449(+) (recO) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGCAGTTAAACGAGTCATTGGGAATTGTTCTTTTTAATAGAAATTATCGAGAAGATGATAAATTGGTCAAGATATTCAC
AGAGGCAGCAGGCAAACGTATGTTTTTCGTGAAACATATTAGTCGTTCTAAACTTTCTTCCGTCATTCAACCTTTAACGG
CTGCTGACTTTATATTTAAGTTGAACGAATCAGGTCTTTCTTATATTGACGACTACAATCATGTGGATACTTATCAACAG
ATTAATCAGGATCTTTTTCGACTTTCCTATGCGAGCTATGTAGTGGCTTTGGCAGATGCCGCTATTTCAGATAATGAGCC
AGATCCTCACCTCTTTGCCTTTTTGAAAAAGACACTTGATTTAATGGAAGAGGGGTTGGATTACGAGGTTTTGACCAACA
TTTTTGAAATCCAAGTTTTAGAGCGTTTTGGGATTAGAATAAACTTTCATGACTGTGTTTTTTGTCATCGTGTCGGTTTA
CCATTTGATTTTTCACATCACTATTCGGGTGTGCTTTGCCCTGAACATTATCATAAAGATGATTACCGGAATCATCTAGA
TCCTAATGTCATCTATTTACTAGACCGTTTTCAAACTATTCAGTTTGATGAATTGAGAACCATTTCCTTAAATGATGAGA
TGAAAAGAAAACTTCGTTATTTTATTGATGAGTTATATCATGACTATGTAGGAATCAAGTTAAAAAGTAAAACGTTTATT
GATGATTTAGCTAAATGGGGCGATATTATGAAACCAAAGGACTAG

Domains

Predicted by InterProScan.

Recombination protein O C terminal (RecO_C)

(83-237)

Recombination protein O N terminal (RecO_N)

(1-77)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recO Streptococcus pneumoniae R6

63.821

96.85

0.618