Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   ELZ56_RS10840 Genome accession   NZ_LR134093
Coordinates   2119602..2120318 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   P0A0I7
Organism   Staphylococcus aureus strain NCTC11965     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2114602..2125318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ56_RS14870 hld 2117189..2117269 (-) 81 WP_000046022.1 delta-hemolysin -
  ELZ56_RS10825 (NCTC11965_02051) - 2117559..2118122 (+) 564 WP_001105709.1 accessory gene regulator AgrB -
  ELZ56_RS10830 (NCTC11965_02052) agrD 2118126..2118266 (+) 141 WP_000735197.1 cyclic lactone autoinducer peptide AgrD -
  ELZ56_RS10835 (NCTC11965_02053) agrC 2118291..2119583 (+) 1293 WP_000387814.1 quorum-sensing sensor histidine kinase AgrC -
  ELZ56_RS10840 (NCTC11965_02054) agrA 2119602..2120318 (+) 717 WP_000688492.1 quorum-sensing response regulator AgrA Regulator
  ELZ56_RS10845 (NCTC11965_02055) - 2120692..2121651 (-) 960 WP_001253292.1 carbohydrate kinase family protein -
  ELZ56_RS10850 (NCTC11965_02056) - 2121648..2123132 (-) 1485 WP_001791588.1 sucrose-6-phosphate hydrolase -
  ELZ56_RS10855 (NCTC11965_02057) - 2123281..2124231 (-) 951 WP_000790325.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=997680 ELZ56_RS10840 WP_000688492.1 2119602..2120318(+) (agrA) [Staphylococcus aureus strain NCTC11965]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=997680 ELZ56_RS10840 WP_000688492.1 2119602..2120318(+) (agrA) [Staphylococcus aureus strain NCTC11965]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATCAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACGTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTAT
TATCAAAAGATAATAGCGTTGAAACGATTGAGTTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTCAGATGTCATAATAGCTTTGTCGTCAATCGTCATAATATCGAATCTATTG
ATTCGAAAGAGCGTATTGTTTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 3BS1
  PDB 4G4K

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1