Detailed information NTG0997635

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABER85_RS01285
• Genome accession: NZ_CP155547
• Coordinates: 264727..265428 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter sp. 8_A20231192
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 259727..270428

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABER85_RS01250 (ABER85_01250)	kdsB	260250..261011 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ABER85_RS01255 (ABER85_01255)	-	261023..262003 (+)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
ABER85_RS01260 (ABER85_01260)	-	262015..262356 (+)	342	WP_001183025.1	PilZ domain-containing protein	-
ABER85_RS01265 (ABER85_01265)	-	262374..263147 (+)	774	WP_000497298.1	TatD family hydrolase	-
ABER85_RS01270 (ABER85_01270)	-	263185..263793 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABER85_RS01275 (ABER85_01275)	-	263803..264357 (+)	555	WP_000841373.1	type II secretion system protein	-
ABER85_RS01280 (ABER85_01280)	xcpV	264347..264727 (+)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABER85_RS01285 (ABER85_01285)	xcpW	264727..265428 (+)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABER85_RS01290 (ABER85_01290)	gspK	265428..266387 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
ABER85_RS01295 (ABER85_01295)	-	266617..267213 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
ABER85_RS01300 (ABER85_01300)	ung	267264..267977 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABER85_RS01305 (ABER85_01305)	-	267974..269098 (+)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
ABER85_RS01310 (ABER85_01310)	tadA	269105..269608 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
ABER85_RS01315 (ABER85_01315)	-	269678..270121 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=997635 ABER85_RS01285 WP_000594584.1 264727..265428(+) (xcpW) [Acinetobacter sp. 8_A20231192]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=997635 ABER85_RS01285 WP_000594584.1 264727..265428(+) (xcpW) [Acinetobacter sp. 8_A20231192]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996