Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ELZ56_RS03280 Genome accession   NZ_LR134093
Coordinates   670539..671213 (+) Length   224 a.a.
NCBI ID   WP_001166499.1    Uniprot ID   Q6GJ11
Organism   Staphylococcus aureus strain NCTC11965     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 665539..676213
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ56_RS03250 (NCTC11965_00615) - 665766..666833 (+) 1068 WP_000980140.1 membrane protein -
  ELZ56_RS03255 (NCTC11965_00616) - 666984..668027 (+) 1044 WP_001030763.1 alpha/beta hydrolase -
  ELZ56_RS03265 (NCTC11965_00617) - 668355..668783 (+) 429 WP_000198502.1 hypothetical protein -
  ELZ56_RS03270 (NCTC11965_00618) - 668981..669487 (-) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  ELZ56_RS03275 (NCTC11965_00619) graX 669600..670523 (+) 924 WP_000802949.1 auxiliary protein GraX/ApsX -
  ELZ56_RS03280 (NCTC11965_00620) braR 670539..671213 (+) 675 WP_001166499.1 response regulator transcription factor GraR/ApsR Regulator
  ELZ56_RS03285 (NCTC11965_00621) graS 671206..672246 (+) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  ELZ56_RS03290 (NCTC11965_00622) vraF 672393..673154 (+) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  ELZ56_RS03295 (NCTC11965_00623) - 673144..675033 (+) 1890 WP_000009406.1 FtsX-like permease family protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.3968

>NTDB_id=997613 ELZ56_RS03280 WP_001166499.1 670539..671213(+) (braR) [Staphylococcus aureus strain NCTC11965]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVIDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=997613 ELZ56_RS03280 WP_001166499.1 670539..671213(+) (braR) [Staphylococcus aureus strain NCTC11965]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGCACGTTAACATGGCAAGATG
CTGTCATTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATTTTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGGGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q6GJ11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406