Detailed information NTG0997591

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: EL041_RS24245
• Genome accession: NZ_LR134092
• Coordinates: 5038772..5039797 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain NCTC10444
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5033772..5044797

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL041_RS24225 (NCTC10444_04803)	metJ	5034833..5035150 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
EL041_RS24230 (NCTC10444_04804)	yiiX	5035334..5035942 (+)	609	WP_000877400.1	YiiX family permuted papain-like enzyme	-
EL041_RS24235 (NCTC10444_04805)	rpmE	5036003..5036215 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
EL041_RS24240 (NCTC10444_04806)	priA	5036418..5038616 (+)	2199	WP_023155166.1	primosomal protein N'	Machinery gene
EL041_RS24245 (NCTC10444_04807)	cytR	5038772..5039797 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
EL041_RS24250 (NCTC10444_04808)	ftsN	5039889..5040848 (+)	960	WP_000068837.1	cell division protein FtsN	-
EL041_RS24255 (NCTC10444_04809)	hslV	5040941..5041471 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
EL041_RS24260 (NCTC10444_04810)	hslU	5041481..5042812 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
EL041_RS24265 (NCTC10444_04811)	menA	5042879..5043805 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
EL041_RS24270 (NCTC10444_04812)	rraA	5043898..5044383 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=997591 EL041_RS24245 WP_000644904.1 5038772..5039797(+) (cytR) [Escherichia coli strain NCTC10444]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=997591 EL041_RS24245 WP_000644904.1 5038772..5039797(+) (cytR) [Escherichia coli strain NCTC10444]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628