Detailed information NTG0997447

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: ABC804_RS08465
• Genome accession: NZ_CP155536
• Coordinates: 1603502..1603942 (+)
• Length: 146 a.a.
• NCBI ID: WP_001808911.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain M264-3
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1598502..1608942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC804_RS08425 (ABC804_08420)	blpZ	1598737..1598985 (-)	249	WP_000276499.1	immunity protein BlpZ	-
ABC804_RS08430 (ABC804_08425)	-	1599027..1599716 (-)	690	WP_000760526.1	CPBP family intramembrane glutamic endopeptidase	-
ABC804_RS08435 (ABC804_08430)	-	1599768..1600151 (-)	384	WP_000877381.1	hypothetical protein	-
ABC804_RS08440 (ABC804_08435)	-	1600937..1601056 (-)	120	WP_000346296.1	PncF family bacteriocin immunity protein	-
ABC804_RS08445 (ABC804_08440)	cipB	1601160..1601309 (-)	150	WP_001808912.1	bacteriocin-like peptide BlpO	Regulator
ABC804_RS08450 (ABC804_08445)	blpI	1601776..1601973 (-)	198	WP_001093258.1	bacteriocin-like peptide BlpI	-
ABC804_RS08455 (ABC804_08450)	comA/nlmT	1602255..1602842 (+)	588	WP_000205166.1	cysteine peptidase family C39 domain-containing protein	Regulator
ABC804_RS08460 (ABC804_08455)	comA/nlmT	1602787..1603512 (+)	726	WP_167750760.1	ABC transporter transmembrane domain-containing protein	Regulator
ABC804_RS08465 (ABC804_08460)	comA/nlmT	1603502..1603942 (+)	441	WP_001808911.1	ATP-binding cassette domain-containing protein	Regulator
ABC804_RS08470 (ABC804_08465)	comA/nlmT	1603926..1604414 (+)	489	WP_307774349.1	ATP-binding cassette domain-containing protein	Regulator
ABC804_RS08475 (ABC804_08470)	-	1604425..1605786 (+)	1362	WP_001069092.1	bacteriocin secretion accessory protein	-
ABC804_RS08480 (ABC804_08475)	blpC	1605843..1605998 (+)	156	WP_000358813.1	quorum-sensing system pheromone BlpC	-
ABC804_RS08485 (ABC804_08480)	-	1606040..1607380 (-)	1341	WP_001017622.1	sensor histidine kinase	-
ABC804_RS08490 (ABC804_08485)	comE/blpR	1607394..1608131 (-)	738	WP_001219127.1	response regulator transcription factor	Regulator
ABC804_RS08495 (ABC804_08490)	-	1608136..1608474 (-)	339	WP_000682119.1	LytTR family DNA-binding domain-containing protein	-

Sequence

Protein

• Length: 146 a.a.
• Molecular weight: 16438.75 Da
• Isoelectric Point: 6.8794

>NTDB_id=997447 ABC804_RS08465 WP_001808911.1 1603502..1603942(+) (comA/nlmT) [Streptococcus pneumoniae strain M264-3]
MSSKISIGQLITFNTLLSYFTTPMENIINLQTKLQSAKVANNRLNEVYLVESEFQVQENPVHSHFLMGDIEFDDLSYKYG
FGRDTLTDINLTIKQGDKVSLVGVSGSGKTTLAKMIVNFFEPYKGHISINHQDIKNIDKKSLAPSY

Nucleotide

• Length: 441 bp

>NTDB_id=997447 ABC804_RS08465 WP_001808911.1 1603502..1603942(+) (comA/nlmT) [Streptococcus pneumoniae strain M264-3]
ATGTCGAGTAAAATTTCTATCGGTCAGCTGATTACCTTTAACACACTTCTTTCTTACTTTACAACTCCTATGGAAAATAT
TATCAACCTCCAAACCAAACTCCAATCTGCGAAGGTCGCTAATAACCGTTTGAACGAAGTCTATCTAGTCGAATCTGAAT
TTCAAGTTCAAGAAAACCCTGTTCATTCACATTTTTTGATGGGCGATATTGAATTTGATGACCTTTCTTATAAGTATGGT
TTTGGACGAGATACCTTAACAGATATTAATCTCACGATTAAACAAGGAGATAAGGTTAGCCTAGTTGGAGTTAGTGGTTC
TGGTAAAACAACTTTAGCCAAAATGATTGTCAATTTCTTTGAACCCTACAAAGGGCATATTTCCATCAATCATCAGGATA
TTAAAAACATTGATAAAAAAAGTCTTGCGCCGTCATATTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (86-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	71.127	97.26	0.692
comA	Streptococcus mitis NCTC 12261	63.38	97.26	0.616
comA	Streptococcus pneumoniae TIGR4	61.972	97.26	0.603
comA	Streptococcus pneumoniae Rx1	61.972	97.26	0.603
comA	Streptococcus pneumoniae D39	61.972	97.26	0.603
comA	Streptococcus pneumoniae R6	61.972	97.26	0.603
comA	Streptococcus mitis SK321	61.972	97.26	0.603
comA	Streptococcus gordonii str. Challis substr. CH1	59.028	98.63	0.582