Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxS   Type   Regulator
Locus tag   ELZ60_RS11700 Genome accession   NZ_LR134090
Coordinates   2231780..2232250 (+) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain NCTC9555     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2226780..2237250
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ELZ60_RS11680 (NCTC9555_02201) coaW 2227090..2227893 (+) 804 WP_000862728.1 type II pantothenate kinase -
  ELZ60_RS11685 (NCTC9555_02202) - 2228023..2228694 (-) 672 WP_000120549.1 DUF2750 domain-containing protein -
  ELZ60_RS11690 (NCTC9555_02203) ldmS 2229093..2230286 (-) 1194 WP_000183709.1 L-aspartate--L-methionine ligase LdmS -
  ELZ60_RS11695 (NCTC9555_02204) - 2230286..2231470 (-) 1185 WP_044122352.1 M20 family metallopeptidase -
  ELZ60_RS11700 (NCTC9555_02205) luxS 2231780..2232250 (+) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  ELZ60_RS11705 (NCTC9555_02206) - 2232402..2232752 (-) 351 WP_001024035.1 membrane protein -
  ELZ60_RS11710 (NCTC9555_02207) - 2232766..2234067 (-) 1302 WP_001242316.1 pyrimidine-nucleoside phosphorylase -
  ELZ60_RS11720 (NCTC9555_02208) deoC 2234347..2235009 (-) 663 WP_001083326.1 deoxyribose-phosphate aldolase -
  ELZ60_RS11725 (NCTC9555_02209) deoD 2235323..2236033 (+) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  ELZ60_RS11730 (NCTC9555_02210) - 2236154..2236597 (-) 444 WP_000070865.1 Dps family protein -
  ELZ60_RS11735 (NCTC9555_02211) - 2236797..2237210 (-) 414 WP_001123306.1 thiol-disulfide oxidoreductase DCC family protein -

Sequence


Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=997425 ELZ60_RS11700 WP_000164421.1 2231780..2232250(+) (luxS) [Staphylococcus aureus strain NCTC9555]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=997425 ELZ60_RS11700 WP_000164421.1 2231780..2232250(+) (luxS) [Staphylococcus aureus strain NCTC9555]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATATGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTATTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains


Predicted by InterProScan.

(5-148)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P65329

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404


Multiple sequence alignment