Detailed information NTG0997400

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: ABC804_RS01415
• Genome accession: NZ_CP155536
• Coordinates: 264379..264840 (+)
• Length: 153 a.a.
• NCBI ID: WP_000250542.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain M264-3
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 259379..269840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC804_RS01380 (ABC804_01380)	-	259871..260929 (+)	1059	WP_000649468.1	zinc-dependent alcohol dehydrogenase family protein	-
ABC804_RS01385 (ABC804_01385)	-	261080..261445 (+)	366	WP_000286415.1	DUF1033 family protein	-
ABC804_RS01390 (ABC804_01390)	comGA/cglA/cilD	261521..262462 (+)	942	WP_000249552.1	competence type IV pilus ATPase ComGA	Machinery gene
ABC804_RS01395 (ABC804_01395)	comGB/cglB	262410..263426 (+)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABC804_RS01400 (ABC804_01400)	comGC/cglC	263428..263754 (+)	327	WP_000738636.1	comG operon protein ComGC	Machinery gene
ABC804_RS01405 (ABC804_01405)	comGD/cglD	263747..264151 (+)	405	WP_000588013.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABC804_RS01410 (ABC804_01410)	comGE/cglE	264114..264416 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABC804_RS01415 (ABC804_01415)	comGF/cglF	264379..264840 (+)	462	WP_000250542.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABC804_RS01420 (ABC804_01420)	comGG/cglG	264818..265231 (+)	414	WP_000265624.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABC804_RS01425 (ABC804_01425)	-	265368..265962 (+)	595	Protein_258	methyltransferase domain-containing protein	-
ABC804_RS01430 (ABC804_01430)	comYH	266023..266976 (+)	954	WP_000345099.1	class I SAM-dependent methyltransferase	Machinery gene
ABC804_RS01435 (ABC804_01435)	-	267027..268217 (+)	1191	WP_000167765.1	acetate kinase	-
ABC804_RS01440 (ABC804_01440)	-	268218..268349 (+)	132	WP_000768904.1	hypothetical protein	-
ABC804_RS01445 (ABC804_01445)	rnpA	268366..268737 (+)	372	WP_000739244.1	ribonuclease P protein component	-
ABC804_RS01450 (ABC804_01450)	-	268712..269536 (+)	825	WP_001809383.1	membrane protein insertase YidC	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17918.53 Da
• Isoelectric Point: 9.3137

>NTDB_id=997400 ABC804_RS01415 WP_000250542.1 264379..264840(+) (comGF/cglF) [Streptococcus pneumoniae strain M264-3]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQTMSQLLISEVRYQQQSEQKEWLLFVDQLEAELDRSQFEKVEGN
RLYMKQDGKDIAIGKSKSDDFRKTNARGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEKS

Nucleotide

• Length: 462 bp

>NTDB_id=997400 ABC804_RS01415 WP_000250542.1 264379..264840(+) (comGF/cglF) [Streptococcus pneumoniae strain M264-3]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTACTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAACTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGATCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGGCAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACGAATGCTCG
TGGTCGAGGTTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae D39	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae R6	96.078	100	0.961
comGF/cglF	Streptococcus pneumoniae TIGR4	96.078	100	0.961
comGF/cglF	Streptococcus mitis SK321	92.157	100	0.922
comGF/cglF	Streptococcus mitis NCTC 12261	90.85	100	0.909