Detailed information NTG0997358

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: ABC811_RS10070
• Genome accession: NZ_CP155535
• Coordinates: 1940370..1940831 (-)
• Length: 153 a.a.
• NCBI ID: WP_000250537.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PJ755/1
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1935370..1945831

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC811_RS10050 (ABC811_10050)	comYH	1936599..1937552 (-)	954	WP_000345118.1	class I SAM-dependent methyltransferase	Machinery gene
ABC811_RS10055 (ABC811_10055)	-	1937898..1938699 (+)	802	WP_128887635.1	IS5 family transposase	-
ABC811_RS10060 (ABC811_10060)	-	1938850..1939326 (+)	477	WP_000777686.1	GNAT family N-acetyltransferase	-
ABC811_RS10065 (ABC811_10065)	comGG/cglG	1940000..1940392 (-)	393	WP_001818966.1	competence type IV pilus minor pilin ComGG	Machinery gene
ABC811_RS10070 (ABC811_10070)	comGF/cglF	1940370..1940831 (-)	462	WP_000250537.1	competence type IV pilus minor pilin ComGF	Machinery gene
ABC811_RS10075 (ABC811_10075)	comGE/cglE	1940794..1941096 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
ABC811_RS10080 (ABC811_10080)	comGD/cglD	1941059..1941463 (-)	405	WP_000588017.1	competence type IV pilus minor pilin ComGD	Machinery gene
ABC811_RS10085 (ABC811_10085)	comGC/cglC	1941456..1941782 (-)	327	WP_000738625.1	competence type IV pilus major pilin ComGC	Machinery gene
ABC811_RS10090 (ABC811_10090)	comGB/cglB	1941784..1942800 (-)	1017	WP_001844019.1	competence type IV pilus assembly protein ComGB	Machinery gene
ABC811_RS10095 (ABC811_10095)	comGA/cglA/cilD	1942748..1943689 (-)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
ABC811_RS10100 (ABC811_10100)	-	1943765..1944130 (-)	366	WP_000286415.1	DUF1033 family protein	-
ABC811_RS10105 (ABC811_10105)	-	1944281..1945339 (-)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17821.32 Da
• Isoelectric Point: 6.4832

>NTDB_id=997358 ABC811_RS10070 WP_000250537.1 1940370..1940831(-) (comGF/cglF) [Streptococcus pneumoniae strain PJ755/1]
MVQNSCWQSKSHKVKAFTLLESLLALIVISGGLLLFQAMSQLLISEVRYQQQSEQKEWLLFVGQLEAELDRSQFEKVEGN
RLYMKQDDKDIAIGKSKSDDFRKTDASGRGYQPMVYGLKSAQITEDNQLVHFRFQFQKGLEREFIYRVEKEES

Nucleotide

• Length: 462 bp

>NTDB_id=997358 ABC811_RS10070 WP_000250537.1 1940370..1940831(-) (comGF/cglF) [Streptococcus pneumoniae strain PJ755/1]
ATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAAGGTCAAGGCTTTTACCTTGTTAGAATCCCTGCTTGCCCTCAT
TGTCATCAGTGGGGGATTACTCCTTTTTCAAGCTATGAGTCAGCTCCTCATTTCAGAAGTTCGCTACCAGCAACAAAGCG
AGCAAAAGGAGTGGCTCTTGTTTGTGGGCCAACTTGAGGCAGAATTAGACCGTTCGCAGTTCGAAAAAGTAGAAGGCAAT
CGCCTATACATGAAGCAAGATGACAAGGACATCGCCATCGGTAAGTCAAAGTCAGACGATTTTCGTAAAACCGATGCTAG
TGGACGGGGGTATCAGCCTATGGTTTATGGCCTCAAATCAGCTCAGATTACAGAGGACAATCAACTGGTTCATTTTCGTT
TCCAGTTTCAAAAAGGCTTAGAAAGGGAGTTCATCTATCGTGTGGAAAAAGAAGAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (45-141)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae Rx1	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae D39	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae R6	93.464	100	0.935
comGF/cglF	Streptococcus pneumoniae TIGR4	93.464	100	0.935
comGF/cglF	Streptococcus mitis SK321	92.157	100	0.922
comGF/cglF	Streptococcus mitis NCTC 12261	90.85	100	0.909