Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrP   Type   Regulator
Locus tag   ABC814_RS09625 Genome accession   NZ_CP155533
Coordinates   1862104..1862925 (-) Length   273 a.a.
NCBI ID   WP_000601682.1    Uniprot ID   A0A4K3G7N8
Organism   Streptococcus pneumoniae strain Spn1439-106     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 1857104..1867925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABC814_RS09585 (ABC814_09585) - 1857650..1857967 (-) 318 WP_000615767.1 thioredoxin family protein -
  ABC814_RS09590 (ABC814_09590) - 1857964..1858263 (-) 300 WP_001013974.1 DUF4651 domain-containing protein -
  ABC814_RS09595 (ABC814_09595) - 1858461..1858688 (-) 228 Protein_1879 N-acetylmuramoyl-L-alanine amidase family protein -
  ABC814_RS09600 (ABC814_09600) - 1858899..1859573 (-) 675 WP_000725719.1 hypothetical protein -
  ABC814_RS09605 (ABC814_09605) - 1859578..1860024 (-) 447 WP_000776596.1 LytTR family DNA-binding domain-containing protein -
  ABC814_RS09610 (ABC814_09610) - 1860138..1860641 (-) 504 WP_000800945.1 phosphatase PAP2 family protein -
  ABC814_RS09615 (ABC814_09615) - 1860638..1861000 (-) 363 WP_000078805.1 DUF2200 domain-containing protein -
  ABC814_RS09620 (ABC814_09620) rcrQ 1861066..1862097 (-) 1032 WP_000506424.1 ATP-binding cassette domain-containing protein Regulator
  ABC814_RS09625 (ABC814_09625) rcrP 1862104..1862925 (-) 822 WP_000601682.1 ABC transporter permease Regulator
  ABC814_RS09630 (ABC814_09630) - 1862942..1863413 (-) 472 Protein_1886 MarR family winged helix-turn-helix transcriptional regulator -
  ABC814_RS09635 (ABC814_09635) - 1863537..1864253 (-) 717 WP_000532876.1 YebC/PmpR family DNA-binding transcriptional regulator -
  ABC814_RS09640 (ABC814_09640) ply 1865134..1866549 (-) 1416 WP_001284361.1 cholesterol-dependent cytolysin pneumolysin -
  ABC814_RS09645 (ABC814_09645) - 1866560..1866970 (-) 411 WP_000595758.1 hypothetical protein -
  ABC814_RS09650 (ABC814_09650) - 1866963..1867571 (-) 609 WP_000083614.1 hypothetical protein -

Sequence


Protein


Download         Length: 273 a.a.        Molecular weight: 30604.17 Da        Isoelectric Point: 5.9310

>NTDB_id=997188 ABC814_RS09625 WP_000601682.1 1862104..1862925(-) (rcrP) [Streptococcus pneumoniae strain Spn1439-106]
MILLAILFTCFSVYLELEVPTYISKITDLLGSQETNLDELWQPASMMMGMSFLAFLSVVAVGFFASRVAASYTSRLRSDI
FNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQMLITMGLQVVTRGSIMAIWAIGKILGHSEYWLWAVLVVVIVNVLMTTV
LMTLAFPKQSLIQGLTDKLNSITRESLTGIRVVRAYNAEDYQNEKFAAVNDELTRLNLFVNRLMAILNPIMMGISSGLSV
AIYWIGAYVINDAAPIARLPLFSDMIIFMSYAM

Nucleotide


Download         Length: 822 bp        

>NTDB_id=997188 ABC814_RS09625 WP_000601682.1 1862104..1862925(-) (rcrP) [Streptococcus pneumoniae strain Spn1439-106]
ATGATTTTACTAGCCATTCTCTTTACTTGCTTTTCGGTCTATCTAGAGTTGGAAGTGCCGACCTATATCTCGAAAATTAC
GGATTTGCTAGGTAGTCAAGAAACTAATTTAGATGAGTTGTGGCAGCCGGCAAGCATGATGATGGGAATGTCCTTTCTTG
CCTTCTTGTCCGTAGTTGCAGTTGGATTTTTTGCATCCCGAGTGGCGGCTTCTTATACTAGTAGGCTGAGAAGTGATATT
TTTAACCGAGTTTTGGATTACTCGCAGACAGAGATTAAGAAATTTTCAATTCCTAGCCTCTTGACGCGTACTACCAATGA
CATTACTCAAGTTCAAATGTTGATTACTATGGGCTTGCAAGTGGTAACGCGTGGTTCAATTATGGCTATCTGGGCTATTG
GGAAGATTTTAGGTCATTCAGAATACTGGCTCTGGGCCGTACTTGTGGTAGTGATTGTCAACGTCCTGATGACGACCGTT
TTGATGACGCTAGCCTTTCCAAAACAGTCCTTGATTCAGGGGTTGACAGATAAACTGAACAGTATCACTCGTGAGAGTTT
AACAGGTATTCGTGTCGTTCGTGCCTACAATGCAGAGGATTATCAAAATGAAAAATTTGCAGCAGTAAATGATGAATTGA
CCCGTTTGAATTTGTTTGTCAACCGTCTTATGGCTATTTTGAATCCTATCATGATGGGGATTTCAAGTGGTTTGAGTGTA
GCGATTTACTGGATTGGGGCCTATGTGATTAACGACGCTGCTCCGATAGCGCGTCTGCCTCTCTTTAGTGACATGATTAT
TTTCATGTCTTATGCCATGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A4K3G7N8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

56.842

100

0.593


Multiple sequence alignment